DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tip60 and kat5a

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001002365.1 Gene:kat5a / 436638 ZFINID:ZDB-GENE-040718-57 Length:541 Species:Danio rerio


Alignment Length:573 Identity:318/573 - (55%)
Similarity:383/573 - (66%) Gaps:80/573 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ICESTAALTEGCRLPV---RMHKTDDWPLAEIVSIKELDGRRQFYVHYVDFNKRLDEWVNEEDLY 77
            :.:.:..:||||||||   .....|:||||||:|:|::.||:.:|||||||||||||||..:.|.
Zfish     1 MADHSVEITEGCRLPVLRRNQENEDEWPLAEILSVKDISGRKLYYVHYVDFNKRLDEWVTPDRLD 65

  Fly    78 TRKVQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQHPGSGALAAIPQTPTGAS--GSVPP 140
            .:|:|||:::..         ||.: :.|:|  |||:||:.....:|....|:.:..|  .:||.
Zfish    66 IKKLQFPKKEAK---------TPMK-NGLSG--SRPSSPERDVKKSLDLHVQSASAPSRGKTVPT 118

  Fly   141 P--------------AGIPNSVAPPGTPSSGGELVNG---------------------NNLAAAL 170
            |              |..|....|..|.:|...|...                     .|...::
Zfish   119 PKRKAESVSLATQVTAATPVPSLPASTEASQAALYTAIRDASFNIKSREEHEPLTSLTTNGTTSI 183

  Fly   171 QKRI-----NRKRKNHGGSAHGHHSLTSQQQQSHPHPTTPQTPTATPVHVTGDGLISGAANDDGD 230
            |:.:     .|||||.||:    ..:....|.:.|..:|..             |:.|   :|..
Zfish   184 QRHLIPPQPGRKRKNCGGT----DEMVKVFQNNSPRCSTVY-------------LLPG---EDSQ 228

  Fly   231 GSQDGKTPTPRQSGSMVTHQ--DDVVTRMKNVEMIELGRHRIKPWYFSPYPQELCQMPCIYICEF 293
            .|.||....||.:||:|:.:  ||:||||||:..|||||||:||||||||||||..:|.||:|||
Zfish   229 DSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIGCIELGRHRLKPWYFSPYPQELTSLPIIYLCEF 293

  Fly   294 CLKYRKSRKCLERHLSKCNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTLY 358
            ||||.||.|||:|||:|||||||||||||||.|||||||||||||.|:||||||||.||||||||
Zfish   294 CLKYLKSLKCLQRHLTKCNLRHPPGNEIYRKGTISFFEIDGRKNKAYSQNLCLLAKCFLDHKTLY 358

  Fly   359 YDTDPFLFYVMTEFDSRGFHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKF 423
            |||||||||||||:|.:|||||||||||||||||||||||||:|||||:|||||||||||||||.
Zfish   359 YDTDPFLFYVMTEYDPKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKV 423

  Fly   424 EGKTGSPEKPLSDLGLLSYRSYWAQTILEIFISQNPSTDGEKPTITINDICECTSIKKEDVISTL 488
            |||||:|||||||||||||||||:||||||.:... |.:||:|.||||:|.|.||||||||||||
Zfish   424 EGKTGTPEKPLSDLGLLSYRSYWSQTILEILMDLK-SENGERPQITINEISEITSIKKEDVISTL 487

  Fly   489 QNLNLINYYKGQYIVCINRVIIEQHRRAMDKRKIRIDSKCLHWTPKDWSKRSK 541
            |.||||||||||||:.::..|:|.|..||.||.:|||.||||:||||||||.|
Zfish   488 QYLNLINYYKGQYILTLSEDIVEGHECAMQKRHLRIDPKCLHFTPKDWSKRGK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 35/57 (61%)
Drf_FH1 84..>157 CDD:283903 20/88 (23%)
PHA01732 139..>196 CDD:222828 17/96 (18%)
NAT_SF 254..533 CDD:302625 224/278 (81%)
MOZ_SAS 316..500 CDD:280097 157/183 (86%)
kat5aNP_001002365.1 Tudor-knot 8..65 CDD:288553 34/56 (61%)
NAT_SF 247..535 CDD:302625 229/288 (80%)
MOZ_SAS 316..499 CDD:280097 157/183 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592805
Domainoid 1 1.000 328 1.000 Domainoid score I1144
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100661
Inparanoid 1 1.050 596 1.000 Inparanoid score I933
OMA 1 1.010 - - QHG53218
OrthoDB 1 1.010 - - D285390at33208
OrthoFinder 1 1.000 - - FOG0004802
OrthoInspector 1 1.000 - - otm24941
orthoMCL 1 0.900 - - OOG6_100632
Panther 1 1.100 - - O PTHR10615
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R415
SonicParanoid 1 1.000 - - X828
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.