DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and lsy-12

DIOPT Version :10

Sequence 1:NP_572151.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001263849.1 Gene:lsy-12 / 3565873 WormBaseID:WBGene00045419 Length:1585 Species:Caenorhabditis elegans


Alignment Length:627 Identity:172/627 - (27%)
Similarity:254/627 - (40%) Gaps:168/627 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EGC--RLPVRMHKTDD-------WPLAEIVSIKELDGRRQFYVHYVDFNKRLDEWVNEEDLYTRK 80
            |||  .:|:.:...|:       .|..|.|::.|              |....|..::|...|::
 Worm   256 EGCIVEVPIPLIDLDNDAVESVTGPQHENVTVSE--------------NVLSTESTDQEVTETKR 306

  Fly    81 VQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQ-HPGSGALAAIPQTPTGASGSVPPPAGI 144
            :....||          ..|.|......:|.||...| .|.|...:....|......|:     :
 Worm   307 LHDSSRD----------FNPPRIQDTPSTVIRPEGDQKDPMSSTSSKRRNTNNSRCASL-----L 356

  Fly   145 PNSVAPPGTP-------------SSGGELVNGNNLAAALQKRINRKRKNHGGSAHGHHSLTSQQQ 196
            .|   |..||             |...|:::.:....|.:.|..|.|          :|..:|::
 Worm   357 SN---PHSTPVTRLMRGILDSENSDNDEMLSNDQSEIAKRPRTPRPR----------YSPEAQRR 408

  Fly   197 -QSHPHPTTPQTPTATPVHVTGDGLIS------GAANDDGD--------GSQDG------KTPTP 240
             .|.....|..|..:..::|.|....|      |.:..|.|        |:|..      |||:|
 Worm   409 TNSRLSALTIDTNRSNDLNVDGSAPSSSSAASCGLSTPDPDRTSQQRRKGNQSAARSRKIKTPSP 473

  Fly   241 RQSGS----MVTHQDDVVTRMKNV----------------------------------------- 260
            ..|..    .:...||.|..:.|:                                         
 Worm   474 PLSQEDEPMELDSDDDPVNELDNLPIVIDDPSYVLTKEHKEIFEQVKKSVSDRNEFSPAQISEIY 538

  Fly   261 -----------EMIELGRHRIKPWYFSPYPQELCQMPCIYICEFCLKYRKSRKCLERHLSKCNLR 314
                       |.|..|...:|.||.||:|.|...:..::|||||..|.:|.:.::.|..||.||
 Worm   539 RSSKGEQARLPERIHFGAFIMKTWYGSPFPAEFINVKKLFICEFCFFYARSDEIMQNHAKKCMLR 603

  Fly   315 HPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTLYYDTDPFLFYVMTEFDSRGFHI 379
            .|||.|||||..||.||:|||..|.|.|.|||::::||:.||::|||:||.||::|..|..|.|.
 Worm   604 APPGLEIYRKGDISVFEVDGRLQKEYCQTLCLVSRMFLESKTVFYDTEPFFFYIVTINDDIGCHF 668

  Fly   380 VGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKFEGKTGSPEKPLSDLGLLSYRS 444
            .|||||||...:..|::||:|:|.||..|.|:.||:.||.||:.|...|.||:|||:||..:|..
 Worm   669 AGYFSKEKYEPDVNNLSCIMTLPCYQEMGLGRFLIDISYALSRKEKWFGGPEQPLSELGRKAYGG 733

  Fly   445 YWAQTIL--------EIFISQNPSTDGEKPTITINDICECTSIKKEDVISTLQNLNLI------- 494
            ||..||.        |:.....         |:|..|.:.|.:...|::..:.:|...       
 Worm   734 YWRTTIASCLGRLKDELEFGSG---------ISIKMIADDTGVNCHDILEVVCSLGWAKPVDPDE 789

  Fly   495 -NYYKGQYIVCINRV-IIEQHRRAMDKRKIRIDSKCLHWTPK 534
             |:||.::.|..:.| ||.:...|..:.|::.|.:||.|.|:
 Worm   790 KNHYKLEWDVDWDMVSIILRESEASKETKVQYDPECLDWVPR 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_572151.1 CBD_TIP60_like 27..90 CDD:350848 13/71 (18%)
PLN00104 <255..533 CDD:215056 115/346 (33%)
lsy-12NP_001263849.1 zf-MYST 547..600 CDD:407644 18/52 (35%)
MOZ_SAS 605..786 CDD:460362 79/189 (42%)

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