DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and mst1

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_594630.1 Gene:mst1 / 2543506 PomBaseID:SPAC637.12c Length:463 Species:Schizosaccharomyces pombe


Alignment Length:502 Identity:204/502 - (40%)
Similarity:286/502 - (56%) Gaps:84/502 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KTDDWPLAEIVSIKELDGRRQFYVHYVDFNKRLDEWVNEEDL-YTRKVQFPRRDGSQTGTSTGVT 98
            |..::..|||:.|::......:||||.|:|||||||:..::: .::.:::|..:           
pombe    31 KDGEYRKAEILMIQKRTRGVVYYVHYNDYNKRLDEWITIDNIDLSKGIEYPPPE----------- 84

  Fly    99 TPQRHHSLAGSVSRPTSPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAP-PGTPSSGGELVN 162
            .|::.|....|..||.:...         .::.|..|.:.|   ..|::..| |.|||  ||   
pombe    85 KPKKAHGKGKSSKRPKAVDR---------RRSITAPSKTEP---STPSTEKPEPSTPS--GE--- 132

  Fly   163 GNNLAAALQKRINRKRKNHGGSAHGHHSLTSQQQQSHPHPTTPQTPTATPVHVTGDGLISGAAND 227
                            .:||.:| |:.||...::...|...                        
pombe   133 ----------------SDHGSNA-GNESLPLLEEDHKPESL------------------------ 156

  Fly   228 DGDGSQDGKTPTPRQSGSMVTHQDDVVTRMKNVEMIELGRHRIKPWYFSPYPQELCQMPCIYICE 292
                |::.:....|.|||||.:..: :.|::|:..|.:|.|.|:||||||||:|..::..:|||.
pombe   157 ----SKEQEVERLRFSGSMVQNPHE-IARIRNINKICIGDHEIEPWYFSPYPKEFSEVDIVYICS 216

  Fly   293 FCLKYRKSRKCLERHLSKCNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTL 357
            ||..|..|.:..:||..||.|:|||||||||...||||||||||.:.:.:|:|||:|||||||.|
pombe   217 FCFCYYGSERQFQRHREKCTLQHPPGNEIYRDDYISFFEIDGRKQRTWCRNICLLSKLFLDHKML 281

  Fly   358 YYDTDPFLFYVMTEFDSRGFHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSK 422
            |||.||||||.|...|..|.|:||||||||||:|:||:|||||:|.|||.|||||||:|||||:|
pombe   282 YYDVDPFLFYCMCRRDEYGCHLVGYFSKEKESSENYNLACILTLPQYQRHGYGKLLIQFSYELTK 346

  Fly   423 FEGKTGSPEKPLSDLGLLSYRSYWAQTILEIFISQNPSTDGEKPTITINDICECTSIKKEDVIST 487
            .|.|.||||||||||||:|||:|||:.|:.:.:.....|       ||:::...||:...||:.|
pombe   347 REHKHGSPEKPLSDLGLISYRAYWAEQIINLVLGMRTET-------TIDELANKTSMTTNDVLHT 404

  Fly   488 LQNLNLINYYKGQYIVCINRVIIEQHRRAMDKRKIRIDSKCL-HWTP 533
            ||.||::.|||||:|:||:..|.:|:.|..:|::.||:...| .|.|
pombe   405 LQALNMLKYYKGQFIICISDGIEQQYERLKNKKRRRINGDLLADWQP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 17/43 (40%)
Drf_FH1 84..>157 CDD:283903 15/73 (21%)
PHA01732 139..>196 CDD:222828 15/57 (26%)
NAT_SF 254..533 CDD:302625 155/279 (56%)
MOZ_SAS 316..500 CDD:280097 114/183 (62%)
mst1NP_594630.1 SAS2 16..447 CDD:227360 201/496 (41%)
Tudor-knot 21..74 CDD:288553 17/42 (40%)
NAT_SF 176..451 CDD:302625 155/282 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 243 1.000 Domainoid score I439
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100661
Inparanoid 1 1.050 358 1.000 Inparanoid score I467
OMA 1 1.010 - - QHG53218
OrthoFinder 1 1.000 - - FOG0004802
OrthoInspector 1 1.000 - - oto101647
orthoMCL 1 0.900 - - OOG6_100632
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R415
SonicParanoid 1 1.000 - - X828
TreeFam 1 0.960 - -
1312.760

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