DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and mys-2

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001309531.1 Gene:mys-2 / 173281 WormBaseID:WBGene00010537 Length:533 Species:Caenorhabditis elegans


Alignment Length:557 Identity:171/557 - (30%)
Similarity:257/557 - (46%) Gaps:157/557 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 INHKYEFDDDVASICESTAA--LTEGCRLPVRMHKTDDWPLAEIVSIKELDGRRQ------FYVH 59
            ||.:|..:..:.:..:...|  :....|.|.:..:|:::        |.::...|      :|||
 Worm    36 INKRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTNNY--------KSIENHEQGAKELMYYVH 92

  Fly    60 YVDFNKRLDEWVNEEDLYTRKVQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQHPGSGAL 124
            |.:.::|.|||:..:.:...:|               |..|                        
 Worm    93 YEELDRRNDEWITLDKILVNEV---------------VVEP------------------------ 118

  Fly   125 AAIPQTPTGASGSVPPPAGIPNS--VAPPGTPSSGGELVNGNNLAAALQKRINRKRKNHGGSAHG 187
              :.:.||.|     |...:...  |.||....||                              
 Worm   119 --VIKVPTKA-----PVEDLHKEIVVGPPVIKPSG------------------------------ 146

  Fly   188 HHSLTSQQQQSHPHPTTPQTPTATPVHVTGDGLISGAANDDGDGSQDGKTPTPRQSGSMVTHQDD 252
              :||..|:::....:          |:..|      .||     .|..|       :.:..:.:
 Worm   147 --ALTRSQRRTLEEYS----------HLKTD------LND-----LDATT-------ARLEREHE 181

  Fly   253 VVTRMKNVEMIELGRHRIKPWYFSPYPQELCQMPCIYICEFCLKYRKSRKCLERHLSKCNLRHPP 317
            ..|::||:..|.:|.|.|..||:||:|.: |:...||:||:||.|....:..::|:..|.:|.||
 Worm   182 ERTKVKNIPQITIGAHEILAWYYSPFPPD-CENLDIYMCEYCLLYTPHHERFKQHIDTCKVRQPP 245

  Fly   318 GNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTLYYDTDPFLFYVMTEFDSRGFHIVGY 382
            |||||||..:|.:|:||...|:|.|.||||:|||:||||||:|.|.|:|||:.|.|..|.|||||
 Worm   246 GNEIYRKDHLSVYEVDGSGQKLYCQCLCLLSKLFMDHKTLYFDVDDFMFYVLCETDEHGAHIVGY 310

  Fly   383 FSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKFEGKTGSPEKPLSDLGLLSYRSYWA 447
            ||:|.||..  |:|||:..||:|:||||||||:||||||:.||..|.|||||||||.:||||||.
 Worm   311 FSREVESAN--NLACIMVFPPFQKKGYGKLLIQFSYELSRREGYIGMPEKPLSDLGKVSYRSYWW 373

  Fly   448 QTILEIF-ISQNPSTDGEKPTITINDICECTSIKKEDVISTLQNLNLINYYK------GQYIVCI 505
            ..::::| |.|.       .|:|...:...:.|..:|::|||..:.:...||      |::.|.|
 Worm   374 WRLMKLFHIHQG-------HTVTATFLSNESGIAVDDIVSTLITMRMCRQYKEPEFIPGEWYVRI 431

  Fly   506 NRVIIEQ---------HRRAMDKRKIRIDSKCLHWTP 533
            :|.|::.         .|..:|:.|:|       |.|
 Worm   432 HRKIVDHCVMCGYGKPPRLLLDRTKVR-------WAP 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 13/60 (22%)
Drf_FH1 84..>157 CDD:283903 9/74 (12%)
PHA01732 139..>196 CDD:222828 8/58 (14%)
NAT_SF 254..533 CDD:302625 132/294 (45%)
MOZ_SAS 316..500 CDD:280097 99/190 (52%)
mys-2NP_001309531.1 Tudor-knot 53..110 CDD:288553 14/64 (22%)
NAT_SF 170..418 CDD:302625 122/264 (46%)
MOZ_SAS 244..418 CDD:280097 97/182 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D285390at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100632
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X828
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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