DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and kat6a

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_031755179.1 Gene:kat6a / 100496520 XenbaseID:XB-GENE-6076141 Length:1904 Species:Xenopus tropicalis


Alignment Length:486 Identity:184/486 - (37%)
Similarity:255/486 - (52%) Gaps:71/486 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LYTRKVQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQ---HPGSGALAAIPQTPT----- 132
            |:.:..|..||..:..|      .|:.......|.:.|:..:   .||.|....:....|     
 Frog   318 LHKKAAQIRRRYTNPIG------RPKNRLKKQSSTTNPSFGKGRGAPGRGRKRKLSMCSTSSDDD 376

  Fly   133 -------GASGSVP---PPAGIPNSVAPPGTPSSGGELVNGNNLAAALQKRINRKRKNHGGSAHG 187
                   |...|||   ...|:.:.:....|||..|.......|..:||:  :|||   |....|
 Frog   377 RSSDDHRGCGTSVPFNKKTKGLIDGLTKFFTPSPDGRKARAEALDYSLQR--SRKR---GPRKSG 436

  Fly   188 HHSLTSQQ-------QQSHPHPTTPQTPTATPVHVTGDGLISGAANDDGDGSQDGKTPTPRQSGS 245
            .....:|:       .:.||                  |:||   ..:....||.:....::.| 
 Frog   437 QADWDNQEGWDCKLDGEDHP------------------GMIS---EKEIALFQDIQEQALQKVG- 479

  Fly   246 MVTHQDDVVTRMKNVEMIELGRHRIKPWYFSPYPQELCQMPCIYICEFCLKYRKSRKCLERHLSK 310
             |....|...|..:|  ||.|::.|:.||.||||||..::|.:|:|||||:|.|||..|::|..|
 Frog   480 -VCGPPDPQVRCPSV--IEFGKYEIQTWYSSPYPQEYTRLPKLYLCEFCLRYMKSRTMLQQHTKK 541

  Fly   311 CNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTLYYDTDPFLFYVMTEFDSR 375
            ||..|||.||||||..:|.||:||:.:.:|.|||||||||||||||||||.:||||||:|:.||:
 Frog   542 CNWFHPPANEIYRKDNLSVFEVDGKVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDSK 606

  Fly   376 GFHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKFEGKTGSPEKPLSDLGLL 440
            |.|:||||||||...:.|||:||:.:|.|||||||:.||:|||.|||.||:.|||||||||||.|
 Frog   607 GCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRL 671

  Fly   441 SYRSYWAQTILEIFISQNPSTDGEKPTITINDICECTSIKKEDVISTLQNLNLINYYKGQYIVCI 505
            ||.:||...:||. :..|     .:..::|..:.:.|.|..:|:.:||..|.::. .:|..:|.:
 Frog   672 SYMAYWKSVVLEC-LHHN-----REHQLSIKRLTKLTGICPQDIAATLHQLRMLE-LRGDRVVLV 729

  Fly   506 NR-VIIEQH--RRAMDKRKIRIDSKCLHWTP 533
            .| ..|:.|  |.....|::.:|.:.|.|||
 Frog   730 RREQQIQTHMSRLQARPREVEVDPEALRWTP 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 1/1 (100%)
Drf_FH1 84..>157 CDD:283903 18/90 (20%)
PHA01732 139..>196 CDD:222828 15/66 (23%)
NAT_SF 254..533 CDD:302625 142/281 (51%)
MOZ_SAS 316..500 CDD:280097 101/183 (55%)
kat6aXP_031755179.1 H15 100..160 CDD:197772
PHD1_MOZ_MORF 203..260 CDD:277090
PHD2_KAT6A_6B 262..308 CDD:277002
PLN00104 <486..760 CDD:215056 142/282 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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