DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment brn and AT3G14960

DIOPT Version :9

Sequence 1:	NP_476901.1	Gene:	brn / 31358	FlyBaseID:	FBgn0000221	Length:	325	Species:	Drosophila melanogaster
Sequence 2:	NP_188114.1	Gene:	AT3G14960 / 820725	AraportID:	AT3G14960	Length:	343	Species:	Arabidopsis thaliana

Alignment Length:	211	Identity:	55/211 - (26%)
Similarity:	81/211 - (38%)	Gaps:	57/211 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 IKSAVGNSRRREAIRRTW---GYEGRFSDVHLRRV---------FLLGTAEDSEKDVAWESR--E 134
            |::...::.||.|:|.||   ..||      |||:         |::|..:|..|.|...|.  .
plant    90 IQTGFRSAGRRRALRNTWMPSDPEG------LRRLEESTGLAIRFIIGKTKDEAKMVELRSEVAM 148

  Fly   135 HGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPE 199
            :.|.:..:..:.|.....||:...:.|...:: ||||:..|||.|:....:...|.:.|...|..
plant   149 YDDFILLDIEEEYSKLPYKTLAFFKAAYALYD-SEFYVKADDDIYLRPDRLSLLLAKERGHSQTY 212

  Fly   200 L--LFAGHVFQTSPLRHKFSKWYVSL-----EEYPFDRWPPYVTAGAFILSQKALRQLYAASVHL 257
            |  :..|.||....|     |||..|     :||....:.|                :||.|.
plant   213 LGCMKKGPVFTDPKL-----KWYEPLADLLGKEYFLHAYGP----------------IYALSA-- 254

  Fly   258 PLFRFDDVYLGIVALK 273
                  ||...:||||
plant   255 ------DVVTSLVALK 264

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
brn	NP_476901.1	Galactosyl_T	92..282	CDD:250845	54/203 (27%)
AT3G14960	NP_188114.1	Galactosyl_T	99..293	CDD:304462	54/202 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	52	1.000	Inparanoid score	I2616
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.960