DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3gnt5b

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001093515.1 Gene:b3gnt5b / 791470 ZFINID:ZDB-GENE-041010-166 Length:401 Species:Danio rerio


Alignment Length:338 Identity:98/338 - (28%)
Similarity:165/338 - (48%) Gaps:31/338 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HRKLLLRCLLVLPLILL---VDYCGLLTHLHELNFERHFHYPLND--DTGSGSASSGLDKFAYLR 64
            |.:|::.|...|.|:..   :|.| ::||:  ::|.  :.|.:|.  ...|....:..|...|..
Zfish    31 HLRLMITCFSTLLLMTYWEKIDNC-VVTHV--MSFS--YRYLINSFKFINSSFIVNPEDAIKYNH 90

  Fly    65 VPSFTAEVPVDQPARLTML-IKSAVGNSRRREAIRRTWGYEGRFSD---VHLRRVFLLGTAEDSE 125
            ......:...|....|.:| :||:..|..||:|||.|||.|....:   |:::.:|.||.....|
Zfish    91 RYLINHQTTCDNKDILLLLFVKSSSENFERRQAIRSTWGNETFIENTLGVNVKVLFALGLHPIPE 155

  Fly   126 ------KDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN 184
                  :|:.:|.:::.|::|.:|.|.:.|.|||.:|.:.|.....:.::|.:..|||.:|...|
Zfish   156 ERGKLKEDLMFEDQKYHDLIQQDFMDTFHNLTLKLLLQLGWKETYCHHAQFLMSADDDVFVHTPN 220

  Fly   185 VLKFLGRGRQSHQPELLFAGHVFQTS-PLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALR 248
            ::.:|....||:..: |:.|.|.:.| |.|.|.||:|||.:.||:..:|.|.....::||:..:.
Zfish   221 LILYLQGFGQSNTRD-LWIGRVHRGSPPNRDKESKYYVSRDLYPWLSYPDYTPGSGYVLSRDVVS 284

  Fly   249 QLYAASVHL-PLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDS---YSSVIASHEFGDP 309
            ::|.||:.: ..|..|||:|||.|....:|   ..|..|.....|.|..   ||.::.||  |..
Zfish   285 RIYQASLTINASFHIDDVFLGICAKMMDVS---PTDHAFFSGEGKAPHHHCIYSQMMTSH--GHV 344

  Fly   310 EEMTRVWNECRSA 322
            .::..:|...|:|
Zfish   345 SDIHEMWRHARNA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 65/200 (33%)
b3gnt5bNP_001093515.1 Galactosyl_T 119..317 CDD:304462 65/201 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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