DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt6

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001038690.1 Gene:b3galt6 / 572324 ZFINID:ZDB-GENE-101104-13 Length:335 Species:Danio rerio


Alignment Length:252 Identity:68/252 - (26%)
Similarity:101/252 - (40%) Gaps:46/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGT----AEDSEKDVAWESR 133
            |.:..|.|.:||.:....:.||..||.||..:   .|..:...|::||    |||.:.....:.|
Zfish    62 PKELSAFLVILITTGPKYTERRSIIRSTWLTK---HDPEVLYWFVIGTEGLPAEDLQNLATEQIR 123

  Fly   134 EHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVS---AKNVLK-------- 187
            .|..:|..:..|:|.|.|.|.:....|. ||....:|.|..|||.:..   .|..||        
Zfish   124 HHDLLLLPDLRDSYENLTQKLLHMYSWL-DQNVEFKFVLKADDDTFARLDLLKEELKVKEPKERL 187

  Fly   188 ----FLGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALR 248
                |.||||      :..||             ||..|..|. .|.:.||...|.::||...:|
Zfish   188 YWGFFSGRGR------VKTAG-------------KWKESAWEL-CDYYLPYALGGGYVLSADLVR 232

  Fly   249 QLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHE 305
            .:......|.:::.:||.||  |..|.:.::...|.||. ..||.....:..:.:|:
Zfish   233 YIRLNVGFLKIWQSEDVSLG--AWLAPVDVKRLHDPRFD-TEYKSRGCSNKYLVTHK 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 57/208 (27%)
b3galt6NP_001038690.1 Galactosyl_T 81..266 CDD:304462 57/210 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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