DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt1b

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_009298719.1 Gene:b3galt1b / 571003 ZFINID:ZDB-GENE-130530-770 Length:331 Species:Danio rerio


Alignment Length:264 Identity:85/264 - (32%)
Similarity:134/264 - (50%) Gaps:20/264 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAED--SEKDVA 129
            :::|.:       |.:||.:.......|:|||.|||.|..|||:.:..:||||.:.|  ..:.|.
Zfish    72 INEPKKCETNVPFLVILITTTHKEFDARQAIRETWGDESTFSDLRIITLFLLGRSTDVVLNQMVE 136

  Fly   130 WESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN----VLKFLG 190
            .||....||:..:|.|:|.|.||||::||||.:...|::::.:..|.|.:|:..|    :||...
Zfish   137 QESEIFHDIVVEDFIDSYHNLTLKTLMGMRWVATFCNQAKYVMKTDSDIFVNMDNLVYKLLKPAT 201

  Fly   191 RGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASV 255
            :.|:.:     |.|:|....|:|...||||:..:.||..::||:.:...::.|......:|..|:
Zfish   202 KPRRRY-----FTGYVINGGPIRDMRSKWYMPRDLYPESKYPPFCSGTGYVFSADVAELIYKTSL 261

  Fly   256 HLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNECR 320
            |..|...:|||:|:...|.||.......|...:.|| ....|..||..|:. .||||.|:||:..
Zfish   262 HTRLLHLEDVYVGVCLRKLGIHPYQNSGFNHWKMAY-SLCRYRRVITVHQI-SPEEMHRIWNDMT 324

  Fly   321 SANY 324
            |..:
Zfish   325 SKKH 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/195 (34%)
b3galt1bXP_009298719.1 Galactosyl_T 97..287 CDD:250845 66/194 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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