DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC565422

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001122198.1 Gene:LOC565422 / 565422 -ID:- Length:354 Species:Danio rerio


Alignment Length:309 Identity:87/309 - (28%)
Similarity:148/309 - (47%) Gaps:63/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGL---DKFAYLRVPS-FTA 70
            ||.|.:..::|::..|..:           ..|..:|   :.:::.||   |....|..|| .|.
Zfish    20 LRSLGIFMVLLVLCLCYYI-----------LPYEFSD---TWTSTVGLFIKDDNVSLTTPSAVTT 70

  Fly    71 EVP------------------VDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFSDV 110
            :.|                  |::|.:       :.:||..|..|...|:|:|.|||.|....|.
Zfish    71 QEPWKPPEPYCVAYPGKYHFIVNEPEKCQKENPFVVLLIPVAPSNKAARDAVRSTWGTEKLVGDK 135

  Fly   111 HLRRVFLLG--TAEDSEK---DVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEF 170
            .:..:||||  |:.||:|   |:..||.::.||:|::|.|:|:|.|:|||:.|.|.:.....:.:
Zfish   136 VVTLLFLLGVSTSNDSQKLHEDLLKESEQYHDIVQSDFWDSYYNLTIKTMIMMEWLTAYCQNTSY 200

  Fly   171 YLFVDDDYYVSAKNVLKFL-GRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPY 234
            .:.||.|.:::.||::..| ...:|::...|:..|.|.    ||:..||||:....:..|.:|||
Zfish   201 VMKVDSDIFLNVKNLVNLLQSAPKQNYMSGLVARGAVV----LRNPNSKWYLPKTTFAPDFYPPY 261

  Fly   235 VTAGAFI----LSQKALRQLYAASVHLPLFRFDDVYLGIVA--LKAGIS 277
            .....::    ||||.:.   ||.:..|:: .:|||||:..  |:.|::
Zfish   262 ALGLGYVFSIDLSQKLVE---AAQLVKPVY-IEDVYLGLCMQHLRIGLT 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/198 (33%)
LOC565422NP_001122198.1 Galactosyl_T 117..309 CDD:304462 66/198 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592658
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm24800
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.850

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