DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3gnt3.3

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001121717.1 Gene:b3gnt3.3 / 561028 ZFINID:ZDB-GENE-081105-12 Length:392 Species:Danio rerio


Alignment Length:328 Identity:93/328 - (28%)
Similarity:148/328 - (45%) Gaps:53/328 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVDYCGLLTHLHELNFERH---FHYPLNDDTGSGSASSGLDKFAYLRVPSFTAEVPVDQPARLTM 82
            |.::..|..|:.:....||   |...|:.....|.|.:..|.|                   |.:
Zfish    72 LPEFSTLPDHIKDFLLYRHCKSFPMILDVPDKCGGAQNSADVF-------------------LLL 117

  Fly    83 LIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDS------EKDVAWESREHGDILQA 141
            :|||:..|..|||.:|:||..|.....|.:||:|::||:...      .:.:..|:.|:.||||.
Zfish   118 VIKSSPENYDRREVLRKTWAEERLHKGVWIRRIFIIGTSSSGLGKRRMNRLLKLENNENKDILQW 182

  Fly   142 EFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAGHV 206
            :|.|::||.|||.:|.:.|...:...:.|.|..|||.:.:..|::::|.....:.....||.|::
Zfish   183 DFNDSFFNLTLKQILFLEWMDRRCPHARFLLNGDDDIFANTFNMIEYLQGQEDNDGSRHLFTGNI 247

  Fly   207 FQ-TSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIV 270
            .| ..|:|.:.||:|:.::....|.:|||...|.|:||....|.:|..|..:.|...||||:|:.
Zfish   248 IQNVGPIRKRSSKYYIPVQIQESDIYPPYCGGGGFLLSGFTARTIYNMSHSVILLPIDDVYMGMC 312

  Fly   271 ALKAGIS-LQH--------------CDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNECR 320
            ..||||. ..|              .|.|   .|.|     |..::..|.| .|..:..:|:|.:
Zfish   313 LKKAGIKPTSHFGVRTAGLRVPVGIVDKF---DPCY-----YREILLVHRF-LPHMIFVMWDEIQ 368

  Fly   321 SAN 323
            :.|
Zfish   369 NPN 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/211 (31%)
b3gnt3.3NP_001121717.1 Galactosyl_T 127..322 CDD:304462 65/194 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592622
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24800
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.800

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