DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt1a

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_017212061.1 Gene:b3galt1a / 559521 ZFINID:ZDB-GENE-120215-203 Length:328 Species:Danio rerio


Alignment Length:347 Identity:100/347 - (28%)
Similarity:158/347 - (45%) Gaps:57/347 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSKHRKLLLRCLLVLPLILLVD-------------YCGLLTHLHE--LNFERHFHYPLNDDTGS 50
            |.||     :.||.:|.::....             |.|.:|.:.:  |.|.::           
Zfish     1 MPSK-----VSCLYLLTVVCWASALWYLSGSRPSTAYVGQMTFIRKPILRFSKN----------- 49

  Fly    51 GSASSGLDKFAYLRVPSFTA---EVPVDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEG 105
                   |.|:.:|..:...   :..:::|.:       |.:||.:.......|:|||.|||.|.
Zfish    50 -------DSFSNIRTRTLNPHNFKFLINEPKKCESTTPFLVLLISTNHKEFDARQAIRETWGDEN 107

  Fly   106 RFSDVHLRRVFLLGTAEDS--EKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRS 168
            .||:||:..:||||.:.:.  .:.|..||:...|||..:|.|:|.|.||||::||||.|.....:
Zfish   108 TFSNVHILTLFLLGYSTEPVLNQMVEQESQIFHDILVEDFVDSYHNLTLKTLMGMRWVSLFCPNA 172

  Fly   169 EFYLFVDDDYYVSAKN-VLKFLGRGRQSHQP-ELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRW 231
            ::.:..|.|.:|:..| |...|   |.:.:| ...|.|||....|:|...|||::..|.||..|:
Zfish   173 QYVMKTDSDIFVNMDNLVFNLL---RPNAKPRRRFFTGHVINGGPIRDVHSKWFMPRELYPDSRY 234

  Fly   232 PPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDS 296
            ||:.:...::.|......||..|:|..|...:|||:|:...|.||.....:.|...:..| ....
Zfish   235 PPFCSGTGYVYSGDMAELLYKTSLHTRLLHLEDVYVGLCLRKLGIQPFQNNGFNHWKMTY-SLCR 298

  Fly   297 YSSVIASHEFGDPEEMTRVWNE 318
            |..|:..|:. .|||:.|:||:
Zfish   299 YRKVLTVHQI-SPEEILRIWND 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 71/193 (37%)
b3galt1aXP_017212061.1 Galactosyl_T 94..281 CDD:250845 71/189 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592650
Domainoid 1 1.000 126 1.000 Domainoid score I5333
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm24800
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3094
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.830

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