DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and B3galt4

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_062293.1 Gene:B3galt4 / 54218 MGIID:1859517 Length:371 Species:Mus musculus


Alignment Length:352 Identity:95/352 - (26%)
Similarity:151/352 - (42%) Gaps:57/352 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSG----LDKFAYL 63
            |..|::||..||::.:..|....||...|..|:.......|         ||.|    |.:....
Mouse     4 SLFRRVLLAVLLLVIIWTLFGPSGLGEELLSLSLASLLPAP---------ASPGPPLALPRLLIS 59

  Fly    64 RVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSE-KD 127
            ...:.....|   |..|.:|:.:|..:..:|.|||.:||.........::.:||||.....: .|
Mouse    60 NSHACGGSGP---PPFLLILVCTAPEHLNQRNAIRASWGAIREARGFRVQTLFLLGKPRRQQLAD 121

  Fly   128 VAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN-VLKFLGR 191
            ::.||..|.|||||.|.|:|.|.||||:.|:.|.:.....:.:.|..|||.||:... |.:.:.|
Mouse   122 LSSESAAHRDILQASFQDSYRNLTLKTLSGLNWVNKYCPMARYILKTDDDVYVNVPELVSELIQR 186

  Fly   192 GRQSHQPE----------------------LLFAGHV-FQTSPLRHKFSKWYVSLEEYPFDRW-- 231
            |..|.|.:                      ||:.|.| ::..|.|...|:.:||.|.:| :.|  
Mouse   187 GGPSEQWQKGKEAQEETTAIHEEHRGQAVPLLYLGRVHWRVRPTRTPESRHHVSEELWP-ENWGP 250

  Fly   232 -PPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHC------DDFRFHRP 289
             |||.:...::||..|::.:...:...|....:||::|:.|.:.|::..||      ..:...|.
Mouse   251 FPPYASGTGYVLSISAVQLILKVASRAPPLPLEDVFVGVSARRGGLAPTHCVKLAGATHYPLDRC 315

  Fly   290 AYKGPDSYSSVIASHEFGDPEEMTRVW 316
            .|.     ..::.||:. ||.:|...|
Mouse   316 CYG-----KFLLTSHKV-DPWQMQEAW 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/223 (30%)
B3galt4NP_062293.1 Galactosyl_T 85..301 CDD:250845 64/216 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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