DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brn and b3gnt3.1

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_005166892.1 Gene:b3gnt3.1 / 494166 ZFINID:ZDB-GENE-040625-129 Length:424 Species:Danio rerio


Alignment Length:337 Identity:97/337 - (28%)
Similarity:153/337 - (45%) Gaps:60/337 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVDYCGLLTHLHELNFERH---FHYPLNDDTGSGSASSGLDKFAYLRVPSFTAEVPVDQPARLTM 82
            |.::..|..|:.:....||   |...|:.....|.|.:..|.|                   |.:
Zfish   105 LPEFSTLQDHIKDFLLYRHCKSFPMILDVHDKCGGAQNSADVF-------------------LLL 150

  Fly    83 LIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDS-EKD-----VAWESREHGDILQA 141
            :|||:..|..|||.:|:||..|.....|.:||||::||:... ||.     :..|:.|:.||||.
Zfish   151 VIKSSPENYDRREVLRKTWAEERLHKGVWIRRVFIIGTSRSGFEKHRLNRLLKLENNENKDILQW 215

  Fly   142 EFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAGHV 206
            :|.|::||.|||.:|.::|...:...:.|.|..|||.:.:..|::::|.....:.....||.||:
Zfish   216 DFNDSFFNLTLKQILFLQWMDRRCPNARFLLDGDDDIFANTFNMIEYLQGQEDNDGSRHLFTGHL 280

  Fly   207 FQ-TSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIV 270
            .| ..|:|...||:||.::.:..:|:|||...|.|:||....|.:|..|..:.|...||||:|:.
Zfish   281 LQKVKPIRKLSSKYYVPVQIHESNRYPPYCGGGGFLLSGFTARTIYKMSHSIILLPIDDVYMGMC 345

  Fly   271 ALKAG---------------ISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNE-- 318
            ..|||               :.:::.|..   .|.|     |..::..|.| .|..:..:|||  
Zfish   346 LEKAGLQPTFHFGVRTFGMNVPIKNADKL---DPCY-----YREILVVHRF-QPHMIFVMWNEIQ 401

  Fly   319 -----CRSANYA 325
                 |...:|:
Zfish   402 NPDLQCSKTHYS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 69/211 (33%)
b3gnt3.1XP_005166892.1 Galactosyl_T 160..354 CDD:304462 69/193 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592621
Domainoid 1 1.000 126 1.000 Domainoid score I5333
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24800
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.800

Return to query results.
Submit another query.