DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brn and irak1

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_012823676.1 Gene:irak1 / 448357 XenbaseID:XB-GENE-488193 Length:760 Species:Xenopus tropicalis


Alignment Length:50 Identity:15/50 - (30%)
Similarity:29/50 - (57%) Gaps:2/50 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VLPLILLVDYCGLLTHLHELNFE-RHFHYPLNDDTGSGSASSGLDKFAYL 63
            |||.:.:.|....:.:.::|..: |..|| .|:.:||||::||..:..::
 Frog   657 VLPRVSVQDPIPPVQYQNQLAVQPRQRHY-CNELSGSGSSTSGASQAIFV 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845
irak1XP_012823676.1 Death_IRAK1 9..94 CDD:260061
STKc_IRAK1 223..521 CDD:271061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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