DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3gnt2a

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_005160201.1 Gene:b3gnt2a / 405766 ZFINID:ZDB-GENE-090312-192 Length:432 Species:Danio rerio


Alignment Length:260 Identity:73/260 - (28%)
Similarity:120/260 - (46%) Gaps:17/260 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 QPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLG-TAE-----DSEKDVAWESRE 134
            :|..|.:.|||...:..||:|||.:||..|......:..||||| ||.     |....|..|:..
Zfish   159 KPPYLLLAIKSLAPHFDRRQAIRESWGRAGILDGQRIATVFLLGNTASTDHFPDLSNMVKHEAEL 223

  Fly   135 HGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPE 199
            :||:||.::.|.:||.|||.:|.:.|.......:::....|||.:|:.:::|.:|.....|...:
Zfish   224 YGDVLQWDYRDTFFNLTLKEVLFLEWFGSHCASAQYVFKGDDDVFVNTRHMLAYLANFSISSTQD 288

  Fly   200 LLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDD 264
            |.....:....|.|.:..|:|:. |......:|||...|.::.|.....:|...|..:.|:..||
Zfish   289 LFIGDVITNAGPHRSRQLKYYIP-ESVFTGGYPPYAGGGGYLYSGSVGLRLRKISRLVTLYPIDD 352

  Fly   265 VYLGIVALKAGISLQHCDDFRF------HRPAYKGPDSYSSVIASHEFGDPEEMTRVWNECRSAN 323
            ||.|:...:.|:..:....|:.      ||   :.|.:|..:|..|. ..|::|.::|:.....|
Zfish   353 VYTGMCLQRLGLVPEKHSGFKTFDIEEKHR---ENPCAYKGLILVHP-RSPQDMIKIWSWINDPN 413

  Fly   324  323
            Zfish   414  413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 57/195 (29%)
b3gnt2aXP_005160201.1 Galactosyl_T 175..>313 CDD:304462 42/138 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592648
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.890

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