DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and B3galt1

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001102424.1 Gene:B3galt1 / 366064 RGDID:1311898 Length:326 Species:Rattus norvegicus


Alignment Length:350 Identity:104/350 - (29%)
Similarity:161/350 - (46%) Gaps:53/350 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGLDKFAYLRV 65
            |.||     :.||.||.::...      :.|..|:..|    |.:..|||       ..|::|.|
  Rat     1 MASK-----VSCLYVLTVVCWA------SALWYLSITR----PTSSYTGS-------KPFSHLTV 43

  Fly    66 --PSFT-------------AEVPVDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFS 108
              .:||             .|..:::|.:       |.:||.:.......|:|||.|||.|..|.
  Rat    44 ARKNFTFGNIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFK 108

  Fly   109 DVHLRRVFLLGTAEDS--EKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFY 171
            .:.:..:||||...|.  .:.|..||:...||:..:|.|:|.|.||||::||||.:...:::::.
  Rat   109 GIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYV 173

  Fly   172 LFVDDDYYVSAKNVL-KFLGRGRQSHQP-ELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPY 234
            :..|.|.:|:..|:: |.|   :.|.:| ...|.|:|....|:|...||||:..:.||...:||:
  Rat   174 MKTDSDIFVNMDNLIYKLL---KPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPF 235

  Fly   235 VTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSS 299
            .:...:|.|......:|..|:|..|...:|||:|:...|.||.......|...:.|| ....|..
  Rat   236 CSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAY-SLCRYRR 299

  Fly   300 VIASHEFGDPEEMTRVWNECRSANY 324
            ||..|:. .||||.|:||:..|..:
  Rat   300 VITVHQI-SPEEMHRIWNDMSSKKH 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 65/193 (34%)
B3galt1NP_001102424.1 Galactosyl_T 92..279 CDD:250845 65/189 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350943
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm63534
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

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