DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and B0024.15

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_741615.2 Gene:B0024.15 / 266924 WormBaseID:WBGene00007104 Length:344 Species:Caenorhabditis elegans


Alignment Length:271 Identity:60/271 - (22%)
Similarity:114/271 - (42%) Gaps:37/271 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LNFERHFHY----PLNDDTGSGSASSGLDK------------------FAYLRVPSFTAEVPVDQ 76
            ||.:|...|    |:.:.|.|.|:.|.|.|                  :.::.||    :.....
 Worm    23 LNLDRIRSYSTDAPIFEVTNSFSSKSHLSKDGSTNQFYHAQFKDQNHTYQFITVP----KKQCSN 83

  Fly    77 PARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDV---HLRRVFLLGTAEDSEKDVAW--ESREHG 136
            ..:|.:.|.|..||...|:|||.||........|   .:|..|::....:...:.|.  |..:..
 Worm    84 NTKLQITILSTAGNFDIRQAIRETWANPNNSEHVANNDVRISFIISKTSNEFLNFALQKEIEKFD 148

  Fly   137 DILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELL 201
            |::..:..::|....||....:.:.......::|.|.:|||..|....:.:.|...:|:....: 
 Worm   149 DMIVTDLYESYELLILKVHAILSYKQSHCQLADFQLKIDDDMAVDMDGLYRSLEDKKQASINGI- 212

  Fly   202 FAGHVFQTS-PLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDV 265
             :|.:::.| |:|.|..:|||....|....:|||:....:::.:.|:.::...:.:...:..:||
 Worm   213 -SGIIWKNSPPVREKKHRWYVPKTLYSEKFFPPYIDGPIYLIGKNAVPRMLEEAKNYNQWIIEDV 276

  Fly   266 Y-LGIV--ALK 273
            : .|::  |||
 Worm   277 FWTGVIGKALK 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 42/191 (22%)
B0024.15NP_741615.2 Galactosyl_T 101..292 CDD:304462 42/189 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6002
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.670

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