DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and B3gnt4

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_011246501.1 Gene:B3gnt4 / 231727 MGIID:2680208 Length:410 Species:Mus musculus


Alignment Length:334 Identity:97/334 - (29%)
Similarity:153/334 - (45%) Gaps:31/334 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRCLLVLPLILLVDYCGLL-----------THLHELNFERHFHYPLNDDTGSGSASSGLDK---- 59
            |.|:|...|::|:..|.||           .|...|...|..|...:.:....:.|..|..    
Mouse    65 LGCVLFCSLVVLLLSCLLLLKERIPAGSSKAHQQFLALPRSHHSQCSPNLTVVNTSLSLPSRHRL 129

  Fly    60 -FAYLRVPSFTAEVPVDQPAR---LTMLIKSAVGNSRRREAIRRTWGYEGRFS-DVHLRRVFLLG 119
             ..|....:|:..:...:.||   |.::|||...:..:|.|||.|||..|.:: ...|:.|||||
Mouse   130 FLTYRHCRNFSILLEPSECARDTFLLLVIKSQPAHIEQRSAIRSTWGRAGSWARGRQLKLVFLLG 194

  Fly   120 TA--EDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSA 182
            .|  ....:.:.:||.:..||||.:|.:.:||.|||.:...||.:....::.|.|..|||.::..
Mouse   195 VAGPVPPAQLLVYESWQFDDILQWDFAEDFFNLTLKELHVQRWIAAACTQAHFILKGDDDVFIHV 259

  Fly   183 KNVLKFLGRGRQSHQPELLFAGHVFQTS-PLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKA 246
            .|||:|| .|....|..|:  |.|.:.: |.|:...|:::....|....:|||...|.:::||..
Mouse   260 PNVLEFL-EGWDPAQDFLV--GDVIRLARPNRNTKVKYFIPFSMYRARHYPPYAGGGGYVMSQAT 321

  Fly   247 LRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFR---FHRPAY-KGPDSYSSVIASHEFG 307
            :|.|:.|.....||..|||::|:...|.|::..|...|:   ..:|.. :.|..|..::..|.. 
Mouse   322 VRHLHMAMEEAELFPIDDVFVGMCLRKLGVTPIHHAGFKTFGIQQPLNPRDPCLYKGLLLVHRL- 385

  Fly   308 DPEEMTRVW 316
            .|.||..:|
Mouse   386 SPLEMWTMW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/193 (34%)
B3gnt4XP_011246501.1 Galactosyl_T 166..355 CDD:389837 65/191 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847386
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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