DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and bre-2

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001255189.1 Gene:bre-2 / 189753 WormBaseID:WBGene00000267 Length:400 Species:Caenorhabditis elegans


Alignment Length:300 Identity:66/300 - (22%)
Similarity:124/300 - (41%) Gaps:38/300 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DTGSGSASSGLD---KFAYLRVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGR-- 106
            |.||....:..|   .:.:|.:|:|.      :.:.:.|::.|...|..||..:|:||.....  
 Worm    99 DDGSNFRIAFTDIQQNYTWLHLPNFL------ENSEILMIVSSNCDNFARRNILRKTWMNPENSQ 157

  Fly   107 -FSDVHLRRVFLLGTAEDSEK---DVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNR 167
             ..|..::.:||:|.....||   .|..|::..||::..:..|.|.|.:.||:..:.::..:...
 Worm   158 IIGDGRMKALFLVGINGADEKLNAVVLEEAKVFGDMIVIDLEDNYLNLSYKTISLLLYSISKTKS 222

  Fly   168 SEFYLFVDDD--YYVSAKNVL---KFLGRGRQSHQPELLFAGHVFQTSPLRH--KFSKWYVSLEE 225
            ......:|:|  :|......|   |.:.....|...|...||     ..:.|  ..:||.:|...
 Worm   223 PNLIGKIDEDVLFYPDQLTPLINDKTINTSTFSIYGEKYEAG-----VAVNHGEDNAKWQISKNS 282

  Fly   226 YPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFD--DVYL-GIVALKAGISLQHCDDFRFH 287
            :....:|.|::...:.|::||.:::..|:.|......|  ||:: |::|...||...........
 Worm   283 FKCSVYPSYLSGPTYFLTRKAAKRIVEATKHRKFISVDVEDVFITGLLAGDVGIKKNQLPFMYMI 347

  Fly   288 RPAYKGPDSYSSVIASH------EFGDPEEMTRVWNECRS 321
            ..|....:|| .::|.|      ::.:..|..:: |.|:|
 Worm   348 EEATNDRESY-EILAWHTKKRDQQYIEAFESLKL-NRCKS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 47/205 (23%)
bre-2NP_001255189.1 Galactosyl_T 141..342 CDD:250845 47/205 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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