DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brn and T15D6.5

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_493136.2 Gene:T15D6.5 / 188532 WormBaseID:WBGene00011780 Length:383 Species:Caenorhabditis elegans


Alignment Length:322 Identity:68/322 - (21%)
Similarity:124/322 - (38%) Gaps:62/322 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKLLLRCLLVLPLILLVDYCGLLTH----LHELNFERHFHYPLNDDTGSGSASSGLDKF------ 60
            ::|.|:..::   ::::.|..||.:    :.||..||......|..|.:|.......:|      
 Worm    45 KRLTLKATII---VVVLFYWVLLQNQEAPISELLEERCDRSGWNYSTTAGRTRDFGSRFRVSFAD 106

  Fly    61 -----AYLRVPSFTAEVPVDQPA---RLTMLIKSAVGNSRRREAIRRTWGYEGRFSDV---HLRR 114
                 .:|.:|.      :..|.   .:.|::.|..|:..||:.:|:||..:.....:   .::.
 Worm   107 IQKSQRWLHLPK------IKNPTWNRDILMIVASRPGSVSRRKVLRKTWMNKANSKIIRNGRMQV 165

  Fly   115 VFLLGTA---EDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLF--V 174
            :||:|..   .|..|.|..|:...|||:.....|.|.|...|.:..:.:.:::  .|:|.:.  :
 Worm   166 LFLVGMVAGDRDLMKAVKKEAESFGDIIVMNLEDTYDNLPFKVLSLLLYGTNK--ASDFKIIGKI 228

  Fly   175 DDDYYVSAKNVLKFLGR-----------GRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPF 228
            |||.......:...|..           |..|...||:          :|::...|||....|..
 Worm   229 DDDVIFFPDRLTPLLDENVIDSSSYSIYGYLSQDDELV----------VRNETKPWYVPETAYNC 283

  Fly   229 DRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYL-GIVALKAGI---SLQHCDDFRF 286
            .::|.|.....::::.||...:...|........:|..: ||:|...||   ||.....:||
 Worm   284 TKYPVYALGPFYLITNKAANLIVENSRFQNFMTVEDALIAGIIAEGLGIQRHSLPMVFRYRF 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 47/212 (22%)
T15D6.5NP_493136.2 Galactosyl_T 140..338 CDD:250845 46/209 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

Return to query results.
Submit another query.