DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and C47F8.3

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_493113.1 Gene:C47F8.3 / 183559 WormBaseID:WBGene00008159 Length:345 Species:Caenorhabditis elegans


Alignment Length:292 Identity:72/292 - (24%)
Similarity:115/292 - (39%) Gaps:55/292 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PLNDDTGSGSASSGLDKFAYLRVPSFTAEVP----VDQPARLTMLIKSAVGNSRRREAIRRTWGY 103
            |.|.|.|    ||.:..||.:........:|    |.....:.||:.|...|..||..:|.||..
 Worm    53 PRNIDFG----SSFIVSFANIHKSQKWIYLPKMKNVTWKHDILMLVVSKTKNFARRNVLRSTWMN 113

  Fly   104 E--------GRFSDVHLRRVFLLGTA---EDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLG 157
            :        ||     :..:|.:|..   ::.:|.|..|:..|||::..:..|.|.|...||:..
 Worm   114 KENSEMMKSGR-----MHALFFVGLVPGDQNLKKLVLEEAEIHGDMVVVDLEDTYDNLPFKTLAL 173

  Fly   158 MRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGR-----------GRQSHQPELLFAGHVFQTSP 211
            :.:.:.:.::.:....:|||.......:|..|.|           |..|...||:          
 Worm   174 LLYGTSKASQFKIIGKIDDDVMFFPDQLLPMLDRNFVNSNTLSIYGHLSTAEELV---------- 228

  Fly   212 LRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYL-GIVALKAG 275
            ||:|...|||....|....:|.||....:::::.|...:...:.|......:|..: ||:|.|.|
 Worm   229 LRNKTEPWYVPETAYNCTVYPVYVMGPIYLVTKDAASLILDNANHQQFMTVEDALITGIIAQKLG 293

  Fly   276 I---SLQHCDDFRFHRPAYKGPDSYSSVIASH 304
            |   ||.:.  ||......:|.|    |:|.|
 Worm   294 IRRYSLPNV--FRHRNDITEGQD----VLAWH 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 51/215 (24%)
C47F8.3NP_493113.1 Galactosyl_T 102..300 CDD:250845 50/212 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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