DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and bre-5

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001255612.1 Gene:bre-5 / 178142 WormBaseID:WBGene00000270 Length:322 Species:Caenorhabditis elegans


Alignment Length:310 Identity:99/310 - (31%)
Similarity:160/310 - (51%) Gaps:25/310 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGLDKFAYLRVPS 67
            |..:|||:..:.:..|.:|    |::....|.:| ..|.:||  :|.:....|...|:...:...
 Worm    16 SSFQKLLIFTITIFLLWVL----GVVDKFRETSF-GDFSWPL--ETRNLQLRSKFTKYPQCKFSG 73

  Fly    68 FTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSE--KDVAW 130
            ...::       :.::|||:..|...||::|:|||.......|.:..:|::|..|:.|  :.:..
 Worm    74 NGQKI-------IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVGRVENMEIMRRIDV 131

  Fly   131 ESREHGDILQAEFTDAYFNNTLKTMLGMRWAS--DQFNRSEFYLFVDDDYYVSAKNVLKFLGRGR 193
            ||.::.|||.....|:|.|||||....:.:|:  :|.:..:|...|||||.|...|::||   .:
 Worm   132 ESEKYKDILAISDIDSYRNNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKF---AK 193

  Fly   194 QSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLP 258
            ...:.||::.|.||.|||.|.|..|..:||.||||.|:||||:|||..|:.:.:.:...:...|.
 Worm   194 TKQKEELVYEGFVFDTSPFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTSETIARFRNSIRKLK 258

  Fly   259 LFRFDDVYLGIVALKAGISLQHCDDFRF--HRPAYKGPDSYSSVIASHEF 306
            :|.||||:.||:|....::..|.::|.|  .|.:.|..|  ..|||.|.:
 Worm   259 MFPFDDVFTGILAKTVNVAATHNENFIFWCRRVSQKEWD--DGVIAVHGY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 71/193 (37%)
bre-5NP_001255612.1 Galactosyl_T 93..282 CDD:304462 71/191 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157430
Domainoid 1 1.000 129 1.000 Domainoid score I3286
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136613
Inparanoid 1 1.050 141 1.000 Inparanoid score I3070
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29201
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - oto18854
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3094
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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