DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and F14B6.6

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001021108.1 Gene:F14B6.6 / 173105 WormBaseID:WBGene00008787 Length:345 Species:Caenorhabditis elegans


Alignment Length:350 Identity:67/350 - (19%)
Similarity:132/350 - (37%) Gaps:65/350 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KHRKLLLRCLLVLPLILLVDY----CGLLTHLHELNFERHFH--YPLNDDTGSG-----SASSGL 57
            |.||:|:...::..|:....|    ...|....::..:|.::  ..:|.....|     |.|...
 Worm     2 KARKILITVAILASLLAYRYYSQRTMEFLIEEDQMCLQREWYESSQINSTADYGNSYQISFSDVQ 66

  Fly    58 DKFAYLRVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAE 122
            ..|.::.:|..:..      ..:.:::.|...:..||..||.||    ...:..::.:||:|...
 Worm    67 STFKWIHIPKISGS------PEILLIVLSRPDDFSRRNVIRHTW----MSQENEIKYLFLIGLGA 121

  Fly   123 DSE---KDVAW-ESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDD------ 177
            :.:   |:|.. |::..|||:.....|.|...:.||:..:.:...:...::....:|.|      
 Worm   122 NMDGKIKEVVMAEAKLFGDIVVTSMEDRYSKLSFKTLTLLLFGVSKVPSAQLIGKIDGDVLFFPN 186

  Fly   178 -YYVSAKNVLKFLGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYV---SLEEYPFDRWPPYVTAG 238
             :..:.||....:.....|...::..|| |...|....:|.|:..   ||..:...|:..|:...
 Worm   187 LFLSTIKNENSMINVTSASVYGKIAEAG-VPIVSNCCKRFLKYNFRRNSLISFGCTRYAFYLAGP 250

  Fly   239 AFILSQKALRQLYAASVHLPLFRFDDVYL-GIVALKAGISLQHCDDFRFHR-------------- 288
            .:::::.|..:|..||.|....:.:|..: |::|....:|     ..:.||              
 Worm   251 FYLVTRSAALRLLEASKHRNFHKIEDTLITGVLADDTDVS-----RVQLHRINLGQEKGTDLVFA 310

  Fly   289 -------PAYKGPDSYSSVIASHEF 306
                   |.||  |.|...::|.:|
 Worm   311 WHSPLNDPEYK--DLYYKTMSSQQF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 43/204 (21%)
F14B6.6NP_001021108.1 Galactosyl_T 95..295 CDD:250845 43/209 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100261
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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