DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and B3galt4

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_598237.2 Gene:B3galt4 / 171079 RGDID:620328 Length:371 Species:Rattus norvegicus


Alignment Length:359 Identity:101/359 - (28%)
Similarity:157/359 - (43%) Gaps:57/359 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSG----LDKFAYL 63
            |..|:|||..||::.:..|....||...|..|:.......|         ||.|    |.:   |
  Rat     4 SLFRRLLLAVLLLVIIWTLFGPSGLGEELLSLSLASLLPAP---------ASPGPPLALPR---L 56

  Fly    64 RVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSE-KD 127
            .:|:..|......|..|.:|:.:|..:..:|.|||.:||.........::.:||||.....: .|
  Rat    57 LIPNPQACGGSGPPPFLLILVCTAPEHLNQRNAIRGSWGAIREARGFRVQTLFLLGEPMGQQFAD 121

  Fly   128 VAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN-VLKFLGR 191
            :|.||...||:|||.|.|:|.|.||||:.|:.|.:.....:.:.|..|||.||:... |.:.:.|
  Rat   122 LASESAAQGDVLQASFQDSYRNLTLKTLTGLNWVNKYCPMARYILKTDDDVYVNVPELVSELIQR 186

  Fly   192 GRQSHQ------PE----------------LLFAGHV-FQTSPLRHKFSKWYVSLEEYPFDRW-- 231
            |..|.|      |:                ||:.|.| ::..|.|...|:.:||.|.:| :.|  
  Rat   187 GGPSEQWQKGKEPQEETTAVHKEHKGQAVPLLYLGRVHWRVRPTRTPESRHHVSEELWP-ENWGP 250

  Fly   232 -PPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHC------DDFRFHRP 289
             |||.:...::||..|::.:...:...|....:||::|:.|.:.|::..||      ..:...|.
  Rat   251 FPPYASGTGYVLSISAVQLILKVASRAPYLPLEDVFVGVSARRGGLAPTHCVKLAGATHYPLDRC 315

  Fly   290 AYKGPDSYSSVIASHEFGDPEEMTRVWNECRSAN 323
            .|.     ..::.||:. ||.:|...|...|..|
  Rat   316 CYG-----KFLLTSHKV-DPWKMQEAWKLVRGLN 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 67/223 (30%)
B3galt4NP_598237.2 Galactosyl_T 85..301 CDD:250845 65/216 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..208 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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