DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and Gm34653

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001363973.1 Gene:Gm34653 / 102637973 MGIID:5593812 Length:368 Species:Mus musculus


Alignment Length:332 Identity:88/332 - (26%)
Similarity:135/332 - (40%) Gaps:46/332 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VDYCGLLTH-----------LHELNF-----ERHFHY-----------------PLNDDTGSGSA 53
            |..|.|.||           .|.|.|     |.:|.:                 .||.:...|:.
Mouse     3 VTLCRLRTHQWCFILFNVILFHALLFGADFVEEYFLHSLPHVDMKILDIKDKARKLNLEPLRGNP 67

  Fly    54 SSGLDKFAYLRVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLL 118
            |    |:..|..|    ||...:...|..||.|:.||..||:.||:.||.........:..:|.|
Mouse    68 S----KYYILNQP----EVCNGKTIFLLSLIFSSPGNGTRRDLIRKAWGSVTTVQGYPILTLFAL 124

  Fly   119 G--TAEDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVS 181
            |  ....:::::..||:::.||::..|.|:..|.|||.:...:||. .|..|..::...|:.:::
Mouse   125 GMPALVTTQEEIDAESQKNNDIIEGIFLDSSENQTLKIISMTQWAV-AFCPSALFILKADEMFIN 188

  Fly   182 AKNVLKFLGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKA 246
            ...::.:| ...:.|...:.....:.|..|.|...|:.:|||.|||...:|.|.:..||||||..
Mouse   189 LPGLVDYL-LNLKGHLEGIYLGRVIHQDIPNRDPHSQEFVSLSEYPEKYYPDYCSGEAFILSQDV 252

  Fly   247 LRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEE 311
            .|.:|......|:....||::||.|...|:...|...|...|........|..:..|.|..| .|
Mouse   253 ARMVYVVLNEAPVMVPADVFVGICAKSVGLIPIHSSRFSGERHITYNRCCYKFIFTSAEVTD-AE 316

  Fly   312 MTRVWNE 318
            .:..|.|
Mouse   317 TSLAWKE 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 54/191 (28%)
Gm34653NP_001363973.1 Galactosyl_T 99..286 CDD:389837 53/188 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847393
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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