DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt4

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_005167417.1 Gene:b3galt4 / 101886595 ZFINID:ZDB-GENE-081104-482 Length:372 Species:Danio rerio


Alignment Length:283 Identity:87/283 - (30%)
Similarity:141/283 - (49%) Gaps:39/283 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YLRVPSFTAEVPVDQPAR--LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLR-----RVFLLG 119
            :|.:||    :.|.:.|:  |..|:.:|..|.:.|:|||.|||     .:||:|     .:|::|
Zfish    79 FLLMPS----IHVCERAKPYLITLVATAPPNRKARQAIRDTWG-----GEVHVRGHRVMTLFVVG 134

  Fly   120 TAEDS--EKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSA 182
            ...|.  .|::..||:|.||::|..|||.|.|.||||:..:.||.....::.:...||||...:.
Zfish   135 QPTDPVIGKELIEESKERGDLIQGRFTDTYTNLTLKTLSILGWARRFCPQAHYVAKVDDDVMFNP 199

  Fly   183 KNVLKFLGRGRQSHQPEL--LFAGHV-FQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQ 244
            ..:|::|....:..:.||  |:.|.| .|.:|.|:..|:.::|...|.....|.|.:..|::||:
Zfish   200 NALLQYLNLSFKRDESELLELYLGRVHMQVAPDRNPASRHFMSETAYAGMVLPDYCSGTAYVLSR 264

  Fly   245 KALRQLYAASVHLPL---FRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKG----PDS---YSS 299
            .||.:|..|:|.:.|   ...:||::||.|..|||:       ..|.|.:.|    |.|   |.:
Zfish   265 SALLKLSLAAVAINLPKPLPPEDVFVGICAHTAGIN-------PTHSPFFSGGPAVPYSRCCYQT 322

  Fly   300 VIASHEFGDPEEMTRVWNECRSA 322
            :::.|. ..|..|...|.:..|:
Zfish   323 MVSVHH-TTPANMLNYWTDMHSS 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 67/202 (33%)
b3galt4XP_005167417.1 Galactosyl_T 107..305 CDD:304462 68/209 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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