DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC101883911

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_009300606.3 Gene:LOC101883911 / 101883911 -ID:- Length:308 Species:Danio rerio


Alignment Length:279 Identity:65/279 - (23%)
Similarity:105/279 - (37%) Gaps:92/279 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YLRVPSFTAEVPVDQPAR--LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLR-----RVFLLG 119
            :|.:||    :.|.:.|:  |..|:.:|..|.:.|:|||.|||     .:||:|     .:|::|
Zfish    76 FLLMPS----IHVCERAKPYLITLVATAPPNRKARQAIRDTWG-----GEVHVRGHRVMTLFVVG 131

  Fly   120 TAEDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN 184
            ...                      ..|:..|.:.:         |.|.|..|..          
Zfish   132 PNR----------------------PGYWKRTNRRV---------FKRDESELLE---------- 155

  Fly   185 VLKFLGRGRQSHQPELLFAGHV-FQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALR 248
                            |:.|.| .|.:|.|:..|:.::|...|.....|.|.:..|::||..||.
Zfish   156 ----------------LYLGRVHMQVAPDRNPASRHFMSETAYAGMVLPDYCSGTAYVLSHSALL 204

  Fly   249 QLYAASVHLPL---FRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKG----PDS---YSSVIAS 303
            :|..|:|.:.|   ...:||::.|.|..|||:       ..|.|.:.|    |.|   |.::::.
Zfish   205 KLSLAAVAINLPKPLPPEDVFVEICAHTAGIN-------PTHSPFFSGGPAVPYSRCCYQTMVSV 262

  Fly   304 HEFGDPEEMTRVWNECRSA 322
            |. ..|..|...|.:..|:
Zfish   263 HH-TTPANMLNYWTDMHSS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 45/198 (23%)
LOC101883911XP_009300606.3 Galactosyl_T 104..241 CDD:328824 46/205 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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