DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC101883349

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_005161047.1 Gene:LOC101883349 / 101883349 -ID:- Length:370 Species:Danio rerio


Alignment Length:253 Identity:69/253 - (27%)
Similarity:124/253 - (49%) Gaps:25/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAE-DSEKDV-AWESREHGDILQAE 142
            ||::: |:.|||.:|||:|.:|..:....:|.:|.||.||.:. .:|..| ..||..:|||:|.|
Zfish    89 LTVVL-SSPGNSSQREAVRNSWANQTVVHNVAVRTVFFLGASPLGAELGVIKEESERYGDIVQFE 152

  Fly   143 -------FTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPEL 200
                   :...:::   :..:.::|......::.|.:..:|..|::...:..:| .|.::| |:.
Zfish   153 GGISRGDWQGGHWD---QVKMALKWILHFCPQARFIILSEDSVYLNLPALTSYL-LGLRTH-PDD 212

  Fly   201 LFAGHVF-QTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYA----ASVHLPLF 260
            |:.|.|. :.:|.|......|:..:.||....|.|.:..||:|||..:|::|.    ||:.||  
Zfish   213 LYLGRVIHRAAPERDPDKPHYLPYQVYPDKYLPDYCSGPAFLLSQDVVRKIYVAAEDASLPLP-- 275

  Fly   261 RFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNE 318
              .|:.:|:.|.:||:...|...|..:|.....|..|:.:.:|...| ..:|...|.:
Zfish   276 --SDILIGLCARRAGVVATHSARFSGNRHIRYNPCCYNFLFSSAGMG-VRQMGIAWRD 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 55/203 (27%)
LOC101883349XP_005161047.1 Galactosyl_T 100..289 CDD:304462 53/197 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3094
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.040

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