DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC101734599

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_004920925.2 Gene:LOC101734599 / 101734599 -ID:- Length:315 Species:Xenopus tropicalis


Alignment Length:263 Identity:81/263 - (30%)
Similarity:125/263 - (47%) Gaps:18/263 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PSFTAEVPVDQPAR----LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSEK 126
            |.|..:: |..|.|    |.:|:.|...::.:|:.||:||..:|..:....:.|||:|...|.|.
 Frog    43 PLFHGDL-VRPPCRDRLVLLILVTSHPAHTEQRKVIRKTWAAQGAMATYPWQAVFLIGRTLDVEL 106

  Fly   127 DVAWE-SREH---GDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLK 187
            |  |. .:||   ||||...:.|.|.|.|||.|.|::||:... :..:.|..|||.:|:.:.:..
 Frog   107 D--WHIHKEHVANGDILMGNYLDTYRNLTLKVMHGLQWAAGTC-QPRYILKTDDDCFVNTERLPA 168

  Fly   188 FLGRGRQSHQPELLFAGHVFQTSP---LRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQ 249
            ||....|..  |.|:.|..|....   :|...||||||.:.|..|.:|||.:...::||....:.
 Frog   169 FLALSNQLR--EGLYVGSTFSREKRVVIRDPSSKWYVSKQSYEPDTYPPYASGIGYVLSLDVAKT 231

  Fly   250 LYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTR 314
            :.|.:...|....:|.|:||:|.:|||.|.....|..|...: ...:|..::..|.....|:...
 Frog   232 VLAVAQATPPIPMEDAYVGILADRAGIKLLSSTRFAKHNLKW-SICNYRYLMVIHRVSPAEQEVA 295

  Fly   315 VWN 317
            :.|
 Frog   296 LGN 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 67/196 (34%)
LOC101734599XP_004920925.2 Galactosyl_T 72..259 CDD:419759 65/191 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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