DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC100536819

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_003201135.2 Gene:LOC100536819 / 100536819 -ID:- Length:362 Species:Danio rerio


Alignment Length:341 Identity:92/341 - (26%)
Similarity:155/341 - (45%) Gaps:43/341 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVLPLILLV---DYCGLLTHLHELNF-----------ERHFHYPLNDDTGSGSASSGLDKFAYL 63
            |:||.|.|||   .|.....|.:.:|.           .:.|...::..|  ..:::.:.:..|:
Zfish    29 LVVLTLSLLVVAYIYHSPYNHFNVVNLIKSCKTESLAVSKDFWNKMHSTT--SISTNPVPQHQYV 91

  Fly    64 RVPSFTAEVPVDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLG-- 119
            ..|| .....:|:..:       :..::..|:.....|.|||.|||.|.......:..:|::|  
Zfish    92 AHPS-NYHFIIDEHEKCKQINPFVVFMVPVALYQREARNAIRSTWGNETTVQGKTVLTLFVVGLT 155

  Fly   120 TAEDSEK---DVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVS 181
            ...||||   .:..|||:|.|::|:.|.|:|||.|:|||:.|.|.:.:..::.|.:.||.|.|::
Zfish   156 VGADSEKAQQQLEEESRQHRDLIQSNFVDSYFNLTIKTMVTMDWLATRCPQATFSMKVDSDMYIN 220

  Fly   182 AKNVLKFLGRGRQSHQPEL----LFAGHVFQTSP-LRHKFSKWYVSLEEYPFDRWPPYVTAGAFI 241
            .:|::..|.|      |||    ...|.:....| :|:|.|::|||.|.||..::|.||...|::
Zfish   221 LENLMTLLLR------PELPRQNYITGFLMWDRPVIRNKKSRYYVSEELYPDTKYPTYVLGVAYV 279

  Fly   242 LSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSY--SSVIASH 304
            .|....::|..||..:..|..:|.|:|....:.|:......|....|...|.|..:  |.||.:.
Zfish   280 FSNDLPKKLVEASKDVAPFNIEDAYIGACLKQIGVKPSRSPDPSQFRTYMKDPKHHDLSKVITTI 344

  Fly   305 EFGDPEEMTRVWNECR 320
            . ..|:::...|...:
Zfish   345 A-RSPKQIVEFWKSVK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 66/199 (33%)
LOC100536819XP_003201135.2 Galactosyl_T 126..316 CDD:328824 66/195 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D174158at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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