DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt5.5

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_031752040.1 Gene:b3galt5.5 / 100495133 XenbaseID:XB-GENE-992015 Length:468 Species:Xenopus tropicalis


Alignment Length:252 Identity:74/252 - (29%)
Similarity:125/252 - (49%) Gaps:15/252 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDS--EKDVAWESREHGDIL 139
            |..|.:|:.:.......|..||:|||.|....|..:...||||...:.  ::::..||..:.||:
 Frog   217 PPFLVLLVTTTHSQKEERNVIRQTWGKERLIGDKLVSTYFLLGAGTNPRLQEELTGESNTYNDII 281

  Fly   140 QAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAG 204
            |.:|.|.|:|.||||::|:.|......::.|.:..|.|.:|:...:::.|.:..|:..   ||.|
 Frog   282 QRDFIDTYYNLTLKTIMGIEWICTHCPQTTFVMKTDTDMFVNPLYLVELLVKKNQTTN---LFTG 343

  Fly   205 HVF-QTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLG 268
            .:. ..:|:|...||||:|..|||..::||:.:...:..|....:::...|..:|.|:.:|||:|
 Frog   344 SLKPHDAPVRDINSKWYISTTEYPLAKYPPFCSGTGYAFSVDVAQRIQNVSGSVPFFKLEDVYVG 408

  Fly   269 IVALKAGISLQ--HCDDFRFHRPAYKGPDS---YSSVIASHEFGDPEEMTRVWNECR 320
            :...|..|:|:  |.:...|   .||.|.:   |..::.||.. .|.|:...|...|
 Frog   409 MCLEKLEINLENLHTEPTFF---PYKIPFNICKYRKLVTSHGV-RPRELYLFWEALR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 60/194 (31%)
b3galt5.5XP_031752040.1 Galactosyl_T 234..422 CDD:419759 59/190 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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