DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt5.2

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_012813706.2 Gene:b3galt5.2 / 100494668 XenbaseID:XB-GENE-992036 Length:311 Species:Xenopus tropicalis


Alignment Length:320 Identity:88/320 - (27%)
Similarity:150/320 - (46%) Gaps:24/320 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLRCLLVLPLILLVDYCGLLTHLHEL-NFERHFHYPLNDDTGSGSASSGLDKFAYLRVPSFTAEV 72
            :||...:...:....:|.||.:|.:. ...|...|       |.|..|...:..:...|....| 
 Frog     1 MLRLKWIFATVFCFGFCVLLLNLQDFCTICRKIFY-------SPSLRSATVRETFQLRPKVQCE- 57

  Fly    73 PVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDS--EKDVAWESREH 135
              ..|..|.:|:.:.......|..||:|||.|....|..:...||||...:.  ::::..||..:
 Frog    58 --RNPPFLVLLVTTNHSQKEERNVIRQTWGKERLIGDKLVSTYFLLGAGTNPRLQEELIEESNTY 120

  Fly   136 GDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPEL 200
            .||:|.:|.|:|:|.||||::|:.|......::.|.:..|.|.:|:...:::.|.:..|:..   
 Frog   121 NDIIQRDFIDSYYNLTLKTIMGIEWICTHCPQTTFVMKTDTDMFVNPLYLVELLVKKNQTTD--- 182

  Fly   201 LFAGHV-FQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDD 264
            ||.|.: ...:|:|...||||:|..|||..::||:.:...::.|....:::...|..:|.|:.:|
 Frog   183 LFTGSLRLHDAPIRDINSKWYISTAEYPQAKYPPFCSGTGYVFSVDVAQRIQNVSSTVPFFKLED 247

  Fly   265 VYLGIVALKAGISLQHC-DDFRFHRPAYKGP---DSYSSVIASHEFGDPEEMTRVWNECR 320
            ||:|:...|..|:||:. .:..|:  |||.|   .:|..::.||.. .|.|:...|...|
 Frog   248 VYVGMCLEKLEINLQNLHTETTFY--AYKKPFTVCNYRKLVTSHGV-QPGEIYLFWEALR 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 60/193 (31%)
b3galt5.2XP_012813706.2 Galactosyl_T 77..265 CDD:419759 60/190 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm72275
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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