DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brn and LOC100494334

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_017953098.2 Gene:LOC100494334 / 100494334 -ID:- Length:421 Species:Xenopus tropicalis


Alignment Length:403 Identity:108/403 - (26%)
Similarity:166/403 - (41%) Gaps:115/403 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFH--YPLN---DDTGSGSASSGL--- 57
            |..||   ..:|||           |.:..:..|.|..||:  |.||   |.|...|.|:.:   
 Frog    31 MTKKH---FWKCLL-----------GSIAAVITLQFALHFNSFYVLNNVIDKTEELSFSNAVMSN 81

  Fly    58 -------------------------------DKFAYLRVPSFTAEVP--VDQPAR---------- 79
                                           |...|....||    |  :|.|.:          
 Frog    82 QSIIKLPYSECKEDTSARNFTNFNKEPQTMKDFLTYRHCRSF----PQLLDSPMKCGGPANSKEV 142

  Fly    80 -LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDS-EKD----VAWESREHGDI 138
             |.:.|||:..|..||||:|:|||.|..::...::|:||:||.:.. ||.    :..||:.:.|:
 Frog   143 SLLLAIKSSPANYERREAVRKTWGVEKTYNGFQVKRIFLIGTPKQKYEKRMMQLLTIESQLYNDV 207

  Fly   139 LQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGR----GRQSHQPE 199
            ||.:|.|:::|.|||.:|.:.|...:...:::....|||.:|:..||:.:|..    |.:.|   
 Frog   208 LQWDFYDSFYNLTLKQVLFLTWFEAKCPGAKYIFDGDDDVFVNTVNVITYLNSLSKDGNKHH--- 269

  Fly   200 LLFAGHVFQTS--PLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRF 262
             ||.| ...|:  |:|....|:||....:..:::.||...|..:::......:...|.::|||..
 Frog   270 -LFVG-ALNTNMPPIRQTNRKYYVPQALFKGNKFDPYCGGGGILIASFTAHSIIRESQYIPLFPI 332

  Fly   263 DDVYLGIVALKA-------------GISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTR 314
            ||||||:...:|             ||.|.:.|.|   .|.|     |..::..|.| .|.||..
 Frog   333 DDVYLGMCLARAGLKPSNHEGIKTLGIRLPNVDSF---DPCY-----YRHMLVVHRF-VPYEMLI 388

  Fly   315 VWN-------ECR 320
            :||       :||
 Frog   389 MWNALQITELKCR 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 64/213 (30%)
LOC100494334XP_017953098.2 Galactosyl_T 156..350 CDD:419759 61/198 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5765
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D174158at33208
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm47879
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.