DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt5.3

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_004912240.1 Gene:b3galt5.3 / 100493669 XenbaseID:XB-GENE-22064803 Length:316 Species:Xenopus tropicalis


Alignment Length:252 Identity:76/252 - (30%)
Similarity:130/252 - (51%) Gaps:15/252 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAED--SEKDVAWESREHGDIL 139
            |..|.:|:.:.......|.|||:|||.:.:..|..:...|||||..:  .::::..||..:.||:
 Frog    65 PPFLVLLVTTTHSQLEARNAIRQTWGKKRQIGDKRVFTYFLLGTVTNLRLQEELIEESNTYNDII 129

  Fly   140 QAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAG 204
            |.:|.|.|:|.||||::|:.|......::.|.:..|.|.:|:...:::.|.:..|:..   ||.|
 Frog   130 QRDFIDTYYNLTLKTIMGVEWICTHCPQTTFLMKTDTDMFVNTLYLVELLVKKNQTTN---LFTG 191

  Fly   205 HVFQ-TSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLG 268
            .:.: ..|:|...||||:|.:|:|..::.|:.:...::.|.....::...|..:|.|:.:|||:|
 Frog   192 SLREDDEPIRDMNSKWYISEKEFPGSKYAPFCSGTGYVFSVDIAHKILNVSSTVPFFKLEDVYVG 256

  Fly   269 IVALKAGISLQ--HCD-DFRFHRPAYK--GPDSYSSVIASHEFGDPEEMTRVWNECR 320
            :...|..|.||  |.: .|..:|||:.  |   |..::.||.. :|.||...|...|
 Frog   257 MCLEKLEIKLQDLHTETTFFAYRPAFTICG---YRKLVTSHGV-EPYEMYLFWEALR 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 60/194 (31%)
b3galt5.3XP_004912240.1 Galactosyl_T 80..270 CDD:389837 59/192 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm72275
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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