DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3gnt4

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_004910572.1 Gene:b3gnt4 / 100491670 XenbaseID:XB-GENE-6039654 Length:363 Species:Xenopus tropicalis


Alignment Length:384 Identity:94/384 - (24%)
Similarity:158/384 - (41%) Gaps:103/384 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVLPLILLVDYCGLLTHLHE----------------------------LNFERHFHYPLNDDTG 49
            |.||.|:|.    |||.:||:                            |.|.|....|||    
 Frog    10 LYVLSLLLF----GLLMYLHKETKSTINSVTPMKEDTPEEQPPFWDATPLTFPRCHSKPLN---- 66

  Fly    50 SGSASSGLDKFAYLRVPSFTAEVPVDQPARLTML-------------------------IKSAVG 89
                              .:..||:.:|.||.::                         |||...
 Frog    67 ------------------LSTLVPLPEPHRLFLMYKHCRNFSTLLKPSKCEKDTFLLLAIKSLPI 113

  Fly    90 NSRRREAIRRTWGYEGRFSDVHLRRVFLLG------TAEDSEKDVAWESREHGDILQAEFTDAYF 148
            |..||.|||.|||.:.......::.:||||      .|:...:.:::||.|..|::|.:|.|.:|
 Frog   114 NIERRIAIRNTWGKQQDIQSKKIKLLFLLGKTDSTLPAKSLRQLLSYESIEFKDLIQWDFVDNFF 178

  Fly   149 NNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPEL-LFAGHVFQTS-P 211
            |.|||.:..:||.:.:.:.::|.|..|||.:::..|:::||    ....|:. ||.|.|...: |
 Frog   179 NLTLKEIHLLRWLNKECSHAKFVLKGDDDVFINTFNIVEFL----DGLNPDKDLFVGDVITNAVP 239

  Fly   212 LRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGI 276
            :|:...|:::....|....:|.|...|.:::|:|..:.|.:::....||..|||::|:...|..:
 Frog   240 IRNTKVKYFIPHSMYSAPHYPLYAGGGGYVMSRKTTKGLLSSAETTDLFPIDDVFVGMCLEKINV 304

  Fly   277 SLQHCDDFR---FHRPAYK-GPDSYSSVIASHEFGDPEEMTRVWN-------ECRSANY 324
            ..|....|:   ..||... .|..|..::..|:. :|.:|..:|:       .|.|.::
 Frog   305 KPQFHAGFKTFGIQRPGNPFDPCLYKGLMVVHKL-NPTDMWIMWSLVKDEELRCASKSF 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 58/197 (29%)
b3gnt4XP_004910572.1 Galactosyl_T 116..307 CDD:389837 57/194 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5765
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm72275
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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