DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC100489278

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_031755254.1 Gene:LOC100489278 / 100489278 -ID:- Length:387 Species:Xenopus tropicalis


Alignment Length:334 Identity:93/334 - (27%)
Similarity:151/334 - (45%) Gaps:54/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKLLLRCLLVL---PLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGLDKFAYLRVPS 67
            :|.||.|.|||   .|::.|.|.              ::....|:....||         :|.|.
 Frog    73 KKTLLFCFLVLCWFVLLVCVSYI--------------YNCIRRDNIAVISA---------IREPI 114

  Fly    68 FTAEV-P--VDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTA- 121
            .|..: |  :::|.|       |.:||.|...:...|:|:|:||..|.....:.::|:||||.: 
 Frog   115 VTEPLYPYLIEEPLRCRGEAPFLVLLIPSMPQDVLVRDALRKTWANESLIPGISIKRIFLLGRSF 179

  Fly   122 -EDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNV 185
             .|.|..|..||....||:|.:|.|.|.|.|:||::|:.|.|....|:.:.:.||.|.:.:...:
 Frog   180 VNDIEISVEQESSTFHDIVQQDFLDTYRNLTVKTLMGIEWVSRLCPRASYVMKVDADMFFNPWFL 244

  Fly   186 LKFLGRGRQSHQPE-----LLFAGHVFQ-TSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQ 244
            :      ||..|||     ..|.|.|.. .||.|:|.|||::...||..:.:|.|.:...::.|.
 Frog   245 V------RQILQPEKPLKLAFFTGLVISGASPRRNKNSKWHILYSEYSKNSYPTYCSGTGYVFSG 303

  Fly   245 KALRQLYAASVHLPLFRFDDVYLGIVALKAG--ISLQHCDDFRFHRPAYKGPDSYSSVIASHEFG 307
            .....||..::.|.:...:||:||:...:.|  ||....:.|...|..|.| ..::.::..|.: 
 Frog   304 GLAPLLYRQAMELAILPLEDVFLGLCLQRIGLYISRPQQNWFNLDRFEYNG-CQFARLVTVHHY- 366

  Fly   308 DPEEMTRVW 316
            .|.::..:|
 Frog   367 KPHQLLTLW 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 63/199 (32%)
LOC100489278XP_031755254.1 Galactosyl_T 151..335 CDD:419759 60/189 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm47879
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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