DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment brn and XB5969542

DIOPT Version :9

Sequence 1:	NP_476901.1	Gene:	brn / 31358	FlyBaseID:	FBgn0000221	Length:	325	Species:	Drosophila melanogaster
Sequence 2:	XP_002937509.1	Gene:	XB5969542 / 100489267	XenbaseID:	XB-GENE-5969543	Length:	409	Species:	Xenopus tropicalis

Alignment Length:	253	Identity:	75/253 - (29%)
Similarity:	129/253 - (50%)	Gaps:	18/253 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    80 LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTA------EDSEKDVAWESREHGDI 138
            |.:::||.:....||:|:|||||.|.......:|.:|||||.      .:.::.:..|.:.:|||
Frog   145 LLIVVKSIIEQHDRRDAVRRTWGKEKEVDGKKIRTLFLLGTTSLGKDHRNLQRLIEQEDQIYGDI 209

  Fly   139 LQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFA 203
            ||.:|.|.:||.|||.:..::|........:|....|||.:|:..|:|.||...:.......||.
Frog   210 LQWDFMDTFFNLTLKEVNFLKWFHIYCPNVQFIFKGDDDIFVNTGNILDFLDFKKDDPLLPSLFV 274

  Fly   204 GHVF-QTSPLRHKFSKWYVSLEEYPFDR-WPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVY 266
            |.:. :.:|:|::.||:::..|.|  |: :|.|...|.|:::....::|:.||..:.||..|||:
Frog   275 GDIISRAAPIRNRQSKYFIPKELY--DKPYPVYAGGGGFLMASSLAQKLFVASEKIQLFPIDDVF 337

  Fly   267 LGIVALKAGISLQHCDDFRF-------HRPAYKGPDSYSSVIASHEFGDPEEMTRVWN 317
            ||:.....|:..:....||.       .....:.|..|.|::..|:... |::.::||
Frog   338 LGMCLSSVGVQPKLHPGFRTFGISKRKSSAMNRDPCFYKSLLVVHKMSS-EDLLKMWN 394

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
brn	NP_476901.1	Galactosyl_T	92..282	CDD:250845	63/197 (32%)
XB5969542	XP_002937509.1	Galactosyl_T	157..350	CDD:389837	63/194 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	118	1.000	Domainoid score	I5765
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1037602at2759
OrthoFinder	1	1.000	-	-		FOG0000088
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3094
SonicParanoid	1	1.000	-	-		X41
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.950