DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt2

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_002932191.1 Gene:b3galt2 / 100487440 XenbaseID:XB-GENE-22172614 Length:421 Species:Xenopus tropicalis


Alignment Length:288 Identity:81/288 - (28%)
Similarity:145/288 - (50%) Gaps:40/288 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GSASSGLDKFAYLRVPSFTAEVPVDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFS 108
            ||....:..:.|:          :::|.:       |.:||.:.......|:|||:|||.|....
 Frog   126 GSGHQNVYHYKYI----------INEPEKCQEKTPFLILLIAAEPRQIEARQAIRQTWGNESLAP 180

  Fly   109 DVHLRRVFLLG---TAED-SEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSE 169
            .....|:||||   ||:. .::.:..|||::.||:|.|:.|.|:|.|:||::||.|.:....:..
 Frog   181 GFRTVRLFLLGLHATADGLIQQAIMDESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPKVL 245

  Fly   170 FYLFVDDDYYVSAKNVL-KFLGRGRQSHQPEL-----LFAGHVFQ-TSPLRHKFSKWYVSLEEYP 227
            :.:..|.|.:|:.:.:: |.|       :|:|     .|.|::.: .:|.|:|.||||:..:.||
 Frog   246 YVMKTDSDMFVNTEYLIHKLL-------KPDLPPRTNYFTGYLMRGYAPNRNKDSKWYMPQDLYP 303

  Fly   228 FDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGIS-LQHCDDFRFH--RP 289
            .:|:|.:.:...::.|.....:::..|:.:.....:|||:||...|..|. :...::|.|:  |.
 Frog   304 SERYPVFCSGTGYVFSGDLAEKIFKVSLSIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRV 368

  Fly   290 AYKGPDSYSSVIASHEFGDPEEMTRVWN 317
            :|.. ..||.:|.||:| .|.|:.:.||
 Frog   369 SYSS-CKYSHLITSHQF-QPGELIKYWN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 60/201 (30%)
b3galt2XP_002932191.1 Galactosyl_T 164..358 CDD:250845 60/200 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm47879
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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