DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC100485652

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_002941819.1 Gene:LOC100485652 / 100485652 -ID:- Length:286 Species:Xenopus tropicalis


Alignment Length:260 Identity:74/260 - (28%)
Similarity:129/260 - (49%) Gaps:25/260 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VDQPAR-------LTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTA--EDSEKDVA 129
            :::|.:       |.:||.|...:...|:|:|:||..|.....:.::|:||||.:  .|.|..|.
 Frog    23 IEEPLQCRGEAPFLVLLIPSMPQDVLVRDALRKTWANESLIPGISIKRIFLLGRSFVNDIEISVE 87

  Fly   130 WESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQ 194
            .||....||:|.:|.|.|.|.|:||::|:.|.|....|:.:.:.||.|.:.:...::      ||
 Frog    88 QESSTFHDIIQQDFLDTYRNLTVKTLMGIEWVSRLCPRASYVMKVDTDMFFNPWFLV------RQ 146

  Fly   195 SHQPEL-----LFAGHVFQTS-PLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAA 253
            ..|||.     .|.|.:..:: |.|:|.||||:..|.||...:|.|.:...::.|.....::|..
 Frog   147 ILQPEKPLKLEFFTGLIIVSAVPFRNKDSKWYIPYEMYPKSYYPTYCSGTGYVFSGDLSPRIYKE 211

  Fly   254 SVHLPLFRFDDVYLGIVALKAGISLQHCDD--FRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVW 316
            ::.|.|..|:||::||...:.|:.:.....  |...|..| ....::.::..|.: .|:|:.::|
 Frog   212 AMGLTLLPFEDVFVGICLERMGVQISEPGGKWFVGERTEY-NRCQFTKLVTDHHY-SPDELLKLW 274

  Fly   317  316
             Frog   275  274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 62/197 (31%)
LOC100485652XP_002941819.1 Galactosyl_T 50..236 CDD:304462 62/191 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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