DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and LOC100333524

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_002666355.2 Gene:LOC100333524 / 100333524 -ID:- Length:309 Species:Danio rerio


Alignment Length:272 Identity:75/272 - (27%)
Similarity:131/272 - (48%) Gaps:26/272 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FTAEVP---VDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSE---K 126
            |..::|   ..|...:.:::..|..|...|.|||.|||.||...|..:..:||||:...:|   :
Zfish    45 FILDLPEKCQQQEPFVVIIVPVAPENIEARNAIRTTWGNEGLVRDKIVLVLFLLGSRSGNETLQE 109

  Fly   127 DVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKF--- 188
            .:..||::|||:||:.|.|.|.|.|:||::.|.|.|.:..::.:...||.|..::.||:|..   
Zfish   110 QLQNESQQHGDLLQSSFQDTYRNLTVKTLVMMEWLSRKCPQASYAAKVDADVLLNVKNLLYMLVS 174

  Fly   189 LGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAA 253
            |....:::...|:.:    ..:.:|...||:|:..:.||..|:|||.....:|.|.....::   
Zfish   175 LNTLERNYITGLVLS----VNNVMRDPTSKFYIPHDVYPRSRYPPYPQGMCYIFSMDLPEKI--- 232

  Fly   254 SVHL-----PLFRFDDVYLGIVALKAGISLQHCD--DFRFHRPAYKGPDSYSSVIASHEFGDPEE 311
             :|:     |:| .:|.|:|:...:.||..:..:  .|....|.:.....||.:||... ..|.:
Zfish   233 -LHISRFVRPIF-IEDAYIGMCLRRLGIRPEKLNFGQFLIRPPEHLDRFYYSGLIAILT-QSPSQ 294

  Fly   312 MTRVWNECRSAN 323
            :...|.:.:|:|
Zfish   295 LISYWMDVQSSN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 60/200 (30%)
LOC100333524XP_002666355.2 Galactosyl_T 72..263 CDD:304462 60/199 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592656
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm24800
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.850

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