DRSC/TRiP Functional Genomics Resources

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Protein Alignment brn and b3galt8

DIOPT Version :9

Sequence 1:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_001343419.2 Gene:b3galt8 / 100003996 ZFINID:ZDB-GENE-131127-583 Length:325 Species:Danio rerio


Alignment Length:343 Identity:84/343 - (24%)
Similarity:160/343 - (46%) Gaps:37/343 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGLDKFAYLRV 65
            |:.:.|..|...|.:..||.||.:.     .:.|.|:           .|...:|.:.|..|..:
Zfish     1 MRKRSRFKLFTYLALAGLITLVFFA-----FNSLVFD-----------PSVPGNSPISKELYKVI 49

  Fly    66 PSFTAEVPVDQP-------ARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAED 123
            ...|....::||       ..|.::|...:.::..|.|||||||.:|....|.:..:|::|....
Zfish    50 SPSTYRFILNQPEVCEKKTPFLILMIPVTLKDAEARTAIRRTWGQDGLVPGVSILHLFVVGQPAR 114

  Fly   124 S----EKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKN 184
            |    ::.:..||:|||||:|.:|.|:|.|.|:|||:.|.|.:.....:.:.:.:|.|.:::...
Zfish   115 SDPVLQEHLQKESKEHGDIIQMDFVDSYQNLTIKTMMIMNWVATYCQSAWYAMKIDADIFLNVHY 179

  Fly   185 VLKFLGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQ 249
            ::.:| .|:...:.:.:....:....|.|...:|||:|.:.||...:||||:..|::.|.....:
Zfish   180 LVDYL-HGQGESRKDYITGSVISDAIPHRDSINKWYISEDLYPKSWYPPYVSGAAYVFSTDLAGK 243

  Fly   250 LYAASVHLPLFRFDDVYLGIVALKAGISLQHCDD-------FRFHRPAYKGPDSYSSVIASHEFG 307
            :..||..:.....:|||:|:.....|:...:...       |...|..|: ..::::.|..:.| 
Zfish   244 ISWASRFVQPIPLEDVYVGLCLDVLGVKPVYATQFLGLRNLFEVRRLKYE-RCTFATRIIVNGF- 306

  Fly   308 DPEEMTRVWNECRSANYA 325
            .|:.:.|:|::.:.:::|
Zfish   307 KPKYLIRIWHDFQKSHFA 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 56/193 (29%)
b3galt8XP_001343419.2 Galactosyl_T 83..273 CDD:328824 56/190 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592646
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm24800
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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