DRSC/TRiP Functional Genomics Resources

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Protein Alignment Xpac and RAD14

DIOPT Version :9

Sequence 1:NP_476866.1 Gene:Xpac / 31357 FlyBaseID:FBgn0004832 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_013928.1 Gene:RAD14 / 855241 SGDID:S000004814 Length:371 Species:Saccharomyces cerevisiae


Alignment Length:369 Identity:85/369 - (23%)
Similarity:147/369 - (39%) Gaps:108/369 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LTNAQKARIERNQAKA-QKLREAKLVS-----------HPFK--ELA----SNKEGGT------- 59
            :|..|||::|.|:..| ::||:..::|           .|.|  .||    ||::...       
Yeast     1 MTPEQKAKLEANRKLAIERLRKRGILSSDQLNRIESRNEPLKTRPLAVTSGSNRDDNAAAAVHVP 65

  Fly    60 ----HPEAALSQGSSVIKVQGTKYIDS------------------------------------GG 84
                .|.|..:..::...:.|:..:|.                                    .|
Yeast    66 NHNGQPSALANTNTNTTSLYGSGVVDGSKRDASVLDKRPTDRIRPSIRKQDYIEYDFATMQNLNG 130

  Fly    85 GFLLEQPVMPTG--------VGPAGLNKSG----------------EEAPPILDDAIAIPVQYEE 125
            |::..:..:|..        ....|..|..                |.|||  .:.|:   :..:
Yeast   131 GYINPKDKLPNSDFTDDQEFESEFGSKKQKTLQDWKKEQLERKMLYENAPP--PEHIS---KAPK 190

  Fly   126 CLECG-DMFADSYLFNNFGHSVCDKC-RDKDERYALITRTEAKAEYLLKDCDFDKREPKLRYISR 188
            |:||. ::..|..|.:.|...||.:| ::..|:|||:|:||.|.:|.|.|.:.:. |.....:.:
Yeast   191 CIECHINIEMDPVLHDVFKLQVCKQCSKEHPEKYALLTKTECKEDYFLTDPELND-EDLFHRLEK 254

  Fly   189 KNPHNVRWGEMKLYLHLQIHQRALEVWGSEEELVRQHEAREDKREEGKARKYNKKMKQLRMEVRS 253
            .|||:..:..|:|::..::...|.:.||.||.|..:.:.||:.:...:.:||.||:|::|::.|:
Yeast   255 PNPHSGTFARMQLFVRCEVEAFAFKKWGGEEGLDEEWQRREEGKAHRREKKYEKKIKEMRLKTRA 319

  Fly   254 SIYT-----KKTHEVHEHEFGPDTYDE--EEDTY---THTCITC 287
            ..||     ||..:.|.|.|. |..|.  :||.|   ...|..|
Yeast   320 QEYTNRLREKKHGKAHIHHFS-DPVDGGIDEDGYQIQRRRCTDC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XpacNP_476866.1 XPA_N 125..154 CDD:279610 9/30 (30%)
rad14 126..296 CDD:273164 55/174 (32%)
XPA_C 156..207 CDD:282967 16/50 (32%)
RAD14NP_013928.1 RAD14 20..371 CDD:227474 78/350 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344830
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5145
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2953
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005516
OrthoInspector 1 1.000 - - oto99742
orthoMCL 1 0.900 - - OOG6_104388
Panther 1 1.100 - - LDO PTHR10142
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1053
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.680

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