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Protein Alignment CG6379 and cmtr1

DIOPT Version :9

Sequence 1:	NP_001284851.1	Gene:	CG6379 / 31355	FlyBaseID:	FBgn0029693	Length:	788	Species:	Drosophila melanogaster
Sequence 2:	NP_956427.1	Gene:	cmtr1 / 393102	ZFINID:	ZDB-GENE-040426-696	Length:	829	Species:	Danio rerio

Alignment Length:	805	Identity:	322/805 - (40%)
Similarity:	468/805 - (58%)	Gaps:	65/805 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 PSDDENS-------EPTPKKIKREWVKSYSNKAMEMMKKMGYENDKGLGKSNQGRLEPIIAVQQD 61
            |||.:||       |.:.|      ...|:|.:.::|.|||:...:||||..|||.|.:.|..|.
Zfish    57 PSDSQNSQGSMAHNEASNK------FAMYNNVSQKLMAKMGFREGEGLGKYGQGRKEIVEASTQR 115

  Fly    62 GRRGFGLKLDTVQSSAG-QWDPACEELEIPEPVLWLHNPGSRADAYSLDQLMGHLVTGEKKLTLD 125
            ||||.||.|...|.... .|:...|...| |.|.|.  |.|..:....|:|...:..|||||.:|
Zfish   116 GRRGLGLMLKGFQGDLNVDWEDEPEPSAI-EQVSWF--PESSPEIPDSDELRDWMTIGEKKLKID 177

  Fly   126 GETRYCDPAILHHILNAKTVFDDLNDNEKRRARSRCNPFETIRSSIFLNRAAVKMANIDSMCNFM 190
            .|..:|...:||.:|..|||||||...|.||||:|.||:||||.:.||||||:||||:|.:.::|
Zfish   178 DEIEFCSENLLHLLLRCKTVFDDLEGEEMRRARTRSNPYETIRGAFFLNRAAMKMANMDHVFDYM 242

  Fly   191 FTNPRDPAGQTLV--APDELLYFTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFKLEKFFA 253
            ||||:|..|:.|.  ...|||||.|:||||||||||||:|:.|.|||||.||:||||||||.|:|
Zfish   243 FTNPKDSQGKVLTRDKEGELLYFGDVCAGPGGFSEYVLWRRRWHAKGFGMTLKGANDFKLEDFYA 307

  Fly   254 ASPESFDTFY---GVKEDGNIFDESNQDSLNEYIRMHTP-QGVHFAMADGGFSVEGQKNIQEILS 314
            |..|.|:.:|   |:..||:|....|..:...::...|. :|:||.|||||||||||:|:|||||
Zfish   308 APSELFEAYYGEGGIDGDGDITRPENISAFRNFVLDSTEGRGLHFLMADGGFSVEGQENLQEILS 372

  Fly   315 KQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLV 379
            |||.||||||||.::||.|.|:||.|||||||||||:||:|.||:::::.||.:|||||||||:|
Zfish   373 KQLLLCQFLTALSVVRPGGHFLCKTFDLFTPFSVGLIYLLYLCFERVSLFKPVTSRPANSERYVV 437

  Fly   380 CKYKRSDAETAGIVAYLNTVNLMLSDESQLDENDVLEIFNANELAEDEDFLRYIIDSNNAIGKKQ 444
            ||..:..  |..:..|:.|:||.| ::.:..:.||:|:...:.:..|.||.:|:|.||.:....|
Zfish   438 CKGLKPG--TDAVREYMFTINLKL-NQFRHSDRDVIEVVPLDIIKGDTDFFQYMIGSNESYCAVQ 499

  Fly   445 IVGLRKIAAFAQNLELKETKQSEVRQECLKRWGLPDKLRQAPE-NKPTDRLLDELLADWANERSW 508
            |..|.||.|:.::..|.|.:|:::|:||||.||:|||.|..|. :.|.::..:  |...:...|:
Zfish   500 IKALAKIHAYVRDTTLFEARQADIRKECLKLWGIPDKARVTPSTSDPKNKFYE--LVKGSEMDSF 562

  Fly   509 LSLPATEMKGVASLNAT----IKNVADWYFVPVGREETNINACSLFLCKSRGNLLRYT----EHK 565
            .|.|       .:||:.    :::|.|:..:..|.|:       |||. :.|....||    ...
Zfish   563 NSRP-------TALNSVNLEKLQHVLDYRCIVGGGEQ-------LFLL-ALGRSQIYTWDGKAPS 612

  Fly   566 KWELVETAFEVQ-PRSIFFG-QIVYEFYGEGRTIQRMAALHIIDGICLGGVDIRRRPYRERVSMC 628
            :|:.:|. |::: ||..... :||.|..|||:..:|:.|:|::|.:.|.|.|:|.:.:.:|:.|.
Zfish   613 RWKKLEN-FKMELPRDTLLSVEIVQELKGEGKAQRRINAVHVLDALVLNGTDVRDQHFNQRIQMV 676

  Fly   629 DKFARSLNKPYRKDRTFGALRSKPLFRLQDMGSFFANMRHYVLKDNS--QRLGFALDDNKFFVPG 691
            :||.::::||.|.|  ...:|.|.::||::|...|..:...:.|.:.  .||.:...|::.|:|.
Zfish   677 EKFVKAVSKPSRPD--MNPIRVKEVYRLEEMEKIFVRLEMKITKSSGGMPRLSYTGRDDRHFLPT 739

  Fly   692 GIMMFCELTNNYVSAHSRSRGQLYYFNVRNKESYYKDQIPRNKADEIFASFRFSFSCRLLWKWTD 756
            |:.:...:.:.:..|.|:|..:.:::|.:.|||.|  .:|....    |.|......||.|.|.:
Zfish   740 GLYIIKTVNDPWTMAFSKSSKRKFFYNKQTKESTY--DLPATSV----APFYVCHQDRLFWAWEE 798

  Fly   757 LRQVEELATEDNPKILFRSDFVKFI 781
            ..:|.:..|..||..|.:.|.|.||
Zfish   799 GVRVHDSQTRINPDKLSKDDVVSFI 823

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.