DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cmtr1 and cmtr1

DIOPT Version :10

Sequence 1:NP_572148.2 Gene:Cmtr1 / 31355 FlyBaseID:FBgn0029693 Length:788 Species:Drosophila melanogaster
Sequence 2:XP_031757413.1 Gene:cmtr1 / 100170565 XenbaseID:XB-GENE-970204 Length:847 Species:Xenopus tropicalis


Alignment Length:810 Identity:294/810 - (36%)
Similarity:442/810 - (54%) Gaps:75/810 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDDENSEPTPKKIKREWVKSYSNKAMEMMKKMGYENDKGLGKSNQGRLEPIIAVQQDGRRGFGLK 69
            |.|..|:|..:.....: ..|::.:.::|.|||:...:||||..|||.|.:...:|.||||.|:.
 Frog    69 SIDAMSDPLAEGTSSRY-SMYNSVSQKLMAKMGFREGEGLGKFGQGRKEIVETSKQKGRRGLGMV 132

  Fly    70 LDTVQSSAG---------------QWDPACEELEIPEPVLWLHNPGSRADAYSLDQLMGHLVTGE 119
            |...:....               .|.|.| ..|||:                .|:|...:...:
 Frog   133 LKGFEKELNINWRTEPEATAYEEVDWFPEC-TTEIPD----------------ADELSDWMTVEK 180

  Fly   120 KKLTLDGETRYCDPAILHHILNAKTVFDDLNDNEKRRARSRCNPFETIRSSIFLNRAAVKMANID 184
            :||.:|.||.:|..::|.::|..|:.||:|...|.||||:|.||:|.||.:.||||||:||||:|
 Frog   181 RKLIIDDETEFCRDSLLTNLLECKSAFDELEGEEMRRARTRSNPYEMIRGAFFLNRAAMKMANVD 245

  Fly   185 SMCNFMFTNPRDPAGQTLV--APDELLYFTDMCAGPGGFSEYVLYRKSWEAKGFGFTLRGANDFK 247
            .:.::|||||:|..|:..:  ...|||||.|:||||||||||||:||.|..||||.||:|.||||
 Frog   246 HVFDYMFTNPKDSHGRPKLKDKESELLYFADVCAGPGGFSEYVLWRKKWHTKGFGMTLKGPNDFK 310

  Fly   248 LEKFFAASPESFDTFY---GVKEDGNIFDESNQDSLNEYIRMHTP-QGVHFAMADGGFSVEGQKN 308
            ||.|:||..|.|:.:|   ||..||::....|..:...:|..:|. :||||.|||||||||||:|
 Frog   311 LEDFYAAPSELFEPYYGEGGVDGDGDVTRPENITAFRNFILDNTEHKGVHFMMADGGFSVEGQEN 375

  Fly   309 IQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLVYLMYKCFQQIAIIKPNSSRPAN 373
            |||||||||.|||||..|.::|..|.|:||.|||||||||||:||:|.||::|.:.||.:|||||
 Frog   376 IQEILSKQLLLCQFLVGLSVVRTGGHFICKTFDLFTPFSVGLIYLLYCCFERICLFKPLTSRPAN 440

  Fly   374 SERYLVCKYKRSDAETAGIVAYLNTVNLMLSDESQLDENDVLEIFNANELAEDEDFLRYIIDSNN 438
            ||||:||:..:...:  .:..||.|||..|:.....|: ||..:.....|..|..|..|::.||.
 Frog   441 SERYVVCRGLKEGID--DVRNYLFTVNRRLNHLRDSDQ-DVSLVVPMEVLRGDRQFYDYMVRSNE 502

  Fly   439 AIGKKQIVGLRKIAAFAQNLELKETKQSEVRQECLKRWGLPDKLRQAPENKPTDRLLDELLADWA 503
            :..:.||..|.||.||.|:..|.|.:|:::|:||||.||:||:.|.||.|........:|:..  
 Frog   503 SHCEVQIKALAKIHAFVQDSTLSEPRQADIRKECLKLWGIPDQARVAPTNTDPRTKFFQLIQS-- 565

  Fly   504 NERSWLSLPATEMKGVASLNATIK---NVADWYFVPVGREETNINACSLFLCKSRGNLLRYT--- 562
                 .::.....|..|....|::   :|.|:..:..|.|.      ...|...|..:  ||   
 Frog   566 -----QNIDVFSYKPTALTAKTLEKLIHVFDYRCMVCGSEP------KFLLGMGRSQI--YTWGG 617

  Fly   563 -EHKKWELVETAFEVQPRSIFFGQIVYEFYGEGRTIQRMAALHIIDGICLGGVDIRRRPYRERVS 626
             .:.:|..::...|:...::...:||.|..|||:..::::|:|::|.:.|.|.|:|...:.:|:.
 Frog   618 RSNDRWTKLDLKTELPRDTLLSVEIVNELKGEGKAQRKISAIHVLDVLFLNGTDVRTHHFTQRIQ 682

  Fly   627 MCDKFARSLNKPYRKDRTFGALRSKPLFRLQDMGSFF--ANMRHYVLKDNSQRLGFALDDNKFFV 689
            |.:||.|:::||.|.|  ...:|.|.::||:::...|  ..|:|........||.:...|::.||
 Frog   683 MAEKFVRAVSKPSRPD--MNPIRVKEVYRLEEIEKIFLRLEMKHIKSSGGFLRLSYTGRDDRHFV 745

  Fly   690 PGGIMMFCELTNNYVSAHSRSRGQLYYFNVRNKESYYKDQIPRNKADEIFASFRFSFSCRLLWKW 754
            |.|:.:...:.:.:..|.|:.:.:.|::|.:.:.|.:...:      |..|.|...:..||.|:|
 Frog   746 PCGLYIVKTINDPWTMAFSKGQKRKYFYNSKTQTSQFVVPV------ESIAPFHVCYYERLFWEW 804

  Fly   755 TDLRQVEELATED-NPKILFRSDFVKFIAD 783
            .:..|:.|...:| :...|.|...::||.:
 Frog   805 GEGVQIHESQKQDPDSGKLSRDTVLQFIQE 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cmtr1NP_572148.2 G-patch 25..69 CDD:396249 19/43 (44%)
FtsJ 172..383 CDD:426399 131/216 (61%)
cmtr1XP_031757413.1 G-patch 88..130 CDD:396249 18/41 (44%)
FtsJ 233..449 CDD:426399 131/215 (61%)
Adenylation_DNA_ligase_like <624..717 CDD:448381 27/94 (29%)
WW 757..787 CDD:197736 5/35 (14%)

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