DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tal1 and CG33557

DIOPT Version :9

Sequence 1:NP_001101428.2 Gene:Tal1 / 313507 RGDID:1306748 Length:329 Species:Rattus norvegicus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:102 Identity:40/102 - (39%)
Similarity:50/102 - (49%) Gaps:27/102 - (26%)


- Green bases have known domain annotations that are detailed below.


  Rat   163 NNNRVKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNE 227
            |....:|||          |..|:      |:|||:|..|||.|:..||.||||.|.::||||.|
  Fly    53 NQGNHRRRP----------PRQKI------NARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIE 101

  Rat   228 ILRLAMKYINFLAK-----------LLNDQEEEGTQR 253
            |:|||..||..|:.           ||:..|.||..|
  Fly   102 IIRLASSYITHLSSTLETGTECQPCLLHKYESEGITR 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tal1NP_001101428.2 bHLH_TS_TAL1 185..249 CDD:381549 32/74 (43%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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