DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and SCS2

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_011046.3 Gene:SCS2 / 856856 SGDID:S000000922 Length:244 Species:Saccharomyces cerevisiae


Alignment Length:268 Identity:67/268 - (25%)
Similarity:116/268 - (43%) Gaps:41/268 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEICLQ 76
            |.|: .|.:..|.|.......::.|||...:.||:||||||.||||||...:.|..:.||::.  
Yeast     6 ISPD-VLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVI-- 67

  Fly    77 PFVYDQQE-----KNKHKFMVQSVLAPMDADLSDLNKLWKDLEPE---QLMDAKLKCVFEMPTAE 133
             |:...:|     |.:.||:|.::.:|.|.:...:..:|.|||.|   |.:..|:|..:.:....
Yeast    68 -FLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKYLISPDV 131

  Fly   134 ANAENTSGGGAVGGGTGAAGGGSAGANTSSASAEALESKPK---LSSEDKFKPSNLLETSESLDL 195
            ..|:|.                :...|..:......:|:||   ....:|..|:. .||...:.:
Yeast   132 HPAQNQ----------------NIQENKETVEPVVQDSEPKEVPAVVNEKEVPAE-PETQPPVQV 179

  Fly   196 LSGEIKALRECNIELRRENLHLKDQITRFRSSPAVKQVNEPYAPVLAEKQIPVFYIAVAIAAAIV 260
            ...|:..:.:..:.      |..::.|. .|:||.:...:..|.|.||.:..  .:.:.|..|::
Yeast   180 KKEEVPPVVQKTVP------HENEKQTS-NSTPAPQNQIKEAATVPAENESS--SMGIFILVALL 235

  Fly   261 SLLLGKFF 268
            .|:||.|:
Yeast   236 ILVLGWFY 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 36/107 (34%)
SCS2NP_011046.3 SCS2 2..244 CDD:227398 67/268 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344961
Domainoid 1 1.000 58 1.000 Domainoid score I2623
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 53 1.000 Inparanoid score I1817
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 1 1.000 - - mtm9170
orthoMCL 1 0.900 - - OOG6_101143
Panther 1 1.100 - - LDO PTHR10809
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2279
SonicParanoid 1 1.000 - - X526
TreeFam 1 0.960 - -
1211.780

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