DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and AT2G23830

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_179963.1 Gene:AT2G23830 / 816915 AraportID:AT2G23830 Length:149 Species:Arabidopsis thaliana


Alignment Length:93 Identity:34/93 - (36%)
Similarity:51/93 - (54%) Gaps:10/93 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            |.|||.: |:|.....:.:...:.|.|.:...:.||:|||....||||||.|.|:|..:.:|.:.
plant     7 LEIEPMY-LQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKSTCKVLVT 70

  Fly    75 LQPFVYDQQE-----KNKHKFMVQSVLA 97
            :|.    |:|     ::..|||:|||||
plant    71 MQA----QKEVPSDMQSFEKFMIQSVLA 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 34/93 (37%)
AT2G23830NP_179963.1 Motile_Sperm 6..113 CDD:334183 34/93 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3931
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332028at2759
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10809
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X526
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.880

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