DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and F52F12.8

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001021485.1 Gene:F52F12.8 / 3565542 WormBaseID:WBGene00009941 Length:123 Species:Caenorhabditis elegans


Alignment Length:94 Identity:23/94 - (24%)
Similarity:42/94 - (44%) Gaps:10/94 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            ::.||..:::|.........|.:.:.|.|.:...||:|.|....:.::|..| |:.:..: :.|.
 Worm     8 ISTEPADKIKFRADPKEEQKTFLKITNKSEMKQAFKVKCTRNDLFRIKPATG-ILDYNQS-LTIA 70

  Fly    75 LQPFVYDQQEKN-----KHKFMVQSVLAP 98
            |   :|...:.|     ||.|.|..:.||
 Worm    71 L---IYRGGQDNVPSDEKHHFGVYHIPAP 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 23/94 (24%)
F52F12.8NP_001021485.1 Motile_Sperm 8..100 CDD:279029 23/94 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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