DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and vapb

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_997812.1 Gene:vapb / 323628 ZFINID:ZDB-GENE-030131-2348 Length:243 Species:Danio rerio


Alignment Length:265 Identity:100/265 - (37%)
Similarity:141/265 - (53%) Gaps:34/265 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            |.:||:|||||.||||..|.|.:.|.|.:...:.||:|||||:|||||||.|.|....|..|.:.
Zfish     8 LLLEPQHELRFRGPFTDVVTTTLKLANPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGTSINVSVM 72

  Fly    75 LQPFVYDQQEKNKHKFMVQSVLAPMDADLSDLNKLWKDLEPEQLMDAKLKCVFEMP-----TAEA 134
            ||||.||..||:||||||||:|||  .|::|...:|||.:||.|||:||:|||:||     |.|.
Zfish    73 LQPFDYDPNEKSKHKFMVQSLLAP--PDMTDTEGVWKDAKPEDLMDSKLRCVFDMPAENEKTHEM 135

  Fly   135 NAENTSGGGAVGGGTGAAGGGSAGANTSSASAEALESKPKLSSEDKFKPSNLLETSESLDLLSGE 199
            .:...|                   :.|.:.:..|..|...||.|..:...::|..:.|..   |
Zfish   136 ESNKIS-------------------SLSKSESSTLSMKSMASSMDDGEVKKIMEECKRLQT---E 178

  Fly   200 IKALRECNIELRRENLHLKDQITRFRSSPAVKQVNEPYAPVLAEKQIPVFYIAVAIAAAIVSLLL 264
            ::.|||.|.::|:|     |...|.|.|..:...:...|..:.|:.:....||:.:...:|.:::
Zfish   179 VQRLREENKQIRQE-----DDGLRMRKSTVMSAPHSSLAVRVKEEGLSSRVIALIVLFFVVGVIV 238

  Fly   265 GKFFL 269
            ||..|
Zfish   239 GKLAL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 58/104 (56%)
vapbNP_997812.1 Motile_Sperm 8..111 CDD:279029 58/104 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594207
Domainoid 1 1.000 116 1.000 Domainoid score I5915
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36163
Inparanoid 1 1.050 160 1.000 Inparanoid score I4213
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332028at2759
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 1 1.000 - - otm24830
orthoMCL 1 0.900 - - OOG6_101143
Panther 1 1.100 - - O PTHR10809
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2279
SonicParanoid 1 1.000 - - X526
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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